The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora

Codonopsis convolvulacea subsp. vinciflora is a commonly used and endangered herb in Tibetan medicine. The chloroplast genome was determined to be 187,634 bp in length and contained a large single-copy and a small single-copy region of 102,174 bp and 8552 bp, respectively. The genome is predicted to...

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Autores principales: Pema, Yangzom, Ma, Chao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253173/
https://www.ncbi.nlm.nih.gov/pubmed/34263037
http://dx.doi.org/10.1080/23802359.2021.1944386
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author Pema, Yangzom
Ma, Chao
author_facet Pema, Yangzom
Ma, Chao
author_sort Pema, Yangzom
collection PubMed
description Codonopsis convolvulacea subsp. vinciflora is a commonly used and endangered herb in Tibetan medicine. The chloroplast genome was determined to be 187,634 bp in length and contained a large single-copy and a small single-copy region of 102,174 bp and 8552 bp, respectively. The genome is predicted to contain 140 genes, including 90 protein-coding genes, 42 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 38.72%. A phylogenetic tree reconstructed by 11 chloroplast genomes reveals that Codonopsis convolvulacea subsp. vinciflora is mostly related to C. tsinglingensis with bootstrap support values of 100%.
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spelling pubmed-82531732021-07-13 The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora Pema, Yangzom Ma, Chao Mitochondrial DNA B Resour Mitogenome Announcement Codonopsis convolvulacea subsp. vinciflora is a commonly used and endangered herb in Tibetan medicine. The chloroplast genome was determined to be 187,634 bp in length and contained a large single-copy and a small single-copy region of 102,174 bp and 8552 bp, respectively. The genome is predicted to contain 140 genes, including 90 protein-coding genes, 42 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 38.72%. A phylogenetic tree reconstructed by 11 chloroplast genomes reveals that Codonopsis convolvulacea subsp. vinciflora is mostly related to C. tsinglingensis with bootstrap support values of 100%. Taylor & Francis 2021-07-01 /pmc/articles/PMC8253173/ /pubmed/34263037 http://dx.doi.org/10.1080/23802359.2021.1944386 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Pema, Yangzom
Ma, Chao
The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora
title The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora
title_full The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora
title_fullStr The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora
title_full_unstemmed The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora
title_short The complete chloroplast genome of Codonopsis convolvulacea subsp. vinciflora
title_sort complete chloroplast genome of codonopsis convolvulacea subsp. vinciflora
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253173/
https://www.ncbi.nlm.nih.gov/pubmed/34263037
http://dx.doi.org/10.1080/23802359.2021.1944386
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