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DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development
Fetal growth restriction (FGR) is the failure of the fetus toachieve its genetically determined growth potential, which increasesrisks for a variety of genetic diseases, such as type 2 diabetes mellitus, coronary artery disease, and stroke, during the lifetime. The dysregulation of DNA methylationis...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253195/ https://www.ncbi.nlm.nih.gov/pubmed/34262655 http://dx.doi.org/10.1080/19768354.2021.1925741 |
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author | Lee, Seoyeong Kim, Young Nam Im, DoHwa Cho, Su Han Kim, Jiyeon Kim, Jeong-Hyun Kim, Kwoneel |
author_facet | Lee, Seoyeong Kim, Young Nam Im, DoHwa Cho, Su Han Kim, Jiyeon Kim, Jeong-Hyun Kim, Kwoneel |
author_sort | Lee, Seoyeong |
collection | PubMed |
description | Fetal growth restriction (FGR) is the failure of the fetus toachieve its genetically determined growth potential, which increasesrisks for a variety of genetic diseases, such as type 2 diabetes mellitus, coronary artery disease, and stroke, during the lifetime. The dysregulation of DNA methylationis known to interact with environmental fluctuations, affect gene expressions comprehensively, and be fatal to fetus development in specific cases. Therefore, we set out to find out epigenetic and transcriptomic alterations associated with FGR development. We found a set of differentially expressed genes associated with differentially methylated regions in placentae and cord blood samples. Using dimensional reduction analysis, the expression and methylation variables of the epigenetically altered genes classified the FGR samples from the controls. These genes were also enriched in the biological pathways such as metabolism and developmental processes related to FGR. Furthermore, three genes of INS, MEG3, and ZFP36L2 are implicated in epigenetic imprinting, which has been associated with FGR. These results strongly suggest that DNA methylation is highly dysregulated during FGR development, and abnormal DNA methylation patterns are likely to alter gene expression. |
format | Online Article Text |
id | pubmed-8253195 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-82531952021-07-13 DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development Lee, Seoyeong Kim, Young Nam Im, DoHwa Cho, Su Han Kim, Jiyeon Kim, Jeong-Hyun Kim, Kwoneel Anim Cells Syst (Seoul) Omics & Bioinformatics Fetal growth restriction (FGR) is the failure of the fetus toachieve its genetically determined growth potential, which increasesrisks for a variety of genetic diseases, such as type 2 diabetes mellitus, coronary artery disease, and stroke, during the lifetime. The dysregulation of DNA methylationis known to interact with environmental fluctuations, affect gene expressions comprehensively, and be fatal to fetus development in specific cases. Therefore, we set out to find out epigenetic and transcriptomic alterations associated with FGR development. We found a set of differentially expressed genes associated with differentially methylated regions in placentae and cord blood samples. Using dimensional reduction analysis, the expression and methylation variables of the epigenetically altered genes classified the FGR samples from the controls. These genes were also enriched in the biological pathways such as metabolism and developmental processes related to FGR. Furthermore, three genes of INS, MEG3, and ZFP36L2 are implicated in epigenetic imprinting, which has been associated with FGR. These results strongly suggest that DNA methylation is highly dysregulated during FGR development, and abnormal DNA methylation patterns are likely to alter gene expression. Taylor & Francis 2021-05-17 /pmc/articles/PMC8253195/ /pubmed/34262655 http://dx.doi.org/10.1080/19768354.2021.1925741 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Omics & Bioinformatics Lee, Seoyeong Kim, Young Nam Im, DoHwa Cho, Su Han Kim, Jiyeon Kim, Jeong-Hyun Kim, Kwoneel DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development |
title | DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development |
title_full | DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development |
title_fullStr | DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development |
title_full_unstemmed | DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development |
title_short | DNA Methylation and gene expression patterns are widely altered in fetal growth restriction and associated with FGR development |
title_sort | dna methylation and gene expression patterns are widely altered in fetal growth restriction and associated with fgr development |
topic | Omics & Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253195/ https://www.ncbi.nlm.nih.gov/pubmed/34262655 http://dx.doi.org/10.1080/19768354.2021.1925741 |
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