The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China

Wurfbainia neoaurantiaca is a medicinal plant endemic to Yunnan Province, China. In this study, its complete chloroplast genome was assembled and characterized. The total genome size of W. neoaurantiaca was 158,484 bp in length, consisting of a large single-copy region (LSC), a small single-copy reg...

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Autores principales: Yang, Chunyong, Wang, Yanqian, Wang, Yanfang, Li, Shuang, Li, Ge, Yan, Zhen, Zhang, Lixia, Qi, Jianjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253217/
https://www.ncbi.nlm.nih.gov/pubmed/34263033
http://dx.doi.org/10.1080/23802359.2021.1938722
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author Yang, Chunyong
Wang, Yanqian
Wang, Yanfang
Li, Shuang
Li, Ge
Yan, Zhen
Zhang, Lixia
Qi, Jianjun
author_facet Yang, Chunyong
Wang, Yanqian
Wang, Yanfang
Li, Shuang
Li, Ge
Yan, Zhen
Zhang, Lixia
Qi, Jianjun
author_sort Yang, Chunyong
collection PubMed
description Wurfbainia neoaurantiaca is a medicinal plant endemic to Yunnan Province, China. In this study, its complete chloroplast genome was assembled and characterized. The total genome size of W. neoaurantiaca was 158,484 bp in length, consisting of a large single-copy region (LSC), a small single-copy region (SSC) and two inverted repeat regions (IRs) with 88,605 bp, 15,285 bp and 29,822 bp, respectively. Its GC content was 36.08%. The chloroplast genome encoded 113 unique genes, including 79 protein-coding, 30 tRNA, and four rRNA genes. The result of the phylogenetic analysis indicated that W. neoaurantiaca was related to W. villosa var. xanthioides and supported de Boer’s classification that W. compacta, W. longiligularis, W. neoaurantiaca, W. villosa, W. villosa var. xanthioides and Amomum krervanh belonged to the Wurfbainia Clade.
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spelling pubmed-82532172021-07-13 The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China Yang, Chunyong Wang, Yanqian Wang, Yanfang Li, Shuang Li, Ge Yan, Zhen Zhang, Lixia Qi, Jianjun Mitochondrial DNA B Resour Mitogenome Announcement Wurfbainia neoaurantiaca is a medicinal plant endemic to Yunnan Province, China. In this study, its complete chloroplast genome was assembled and characterized. The total genome size of W. neoaurantiaca was 158,484 bp in length, consisting of a large single-copy region (LSC), a small single-copy region (SSC) and two inverted repeat regions (IRs) with 88,605 bp, 15,285 bp and 29,822 bp, respectively. Its GC content was 36.08%. The chloroplast genome encoded 113 unique genes, including 79 protein-coding, 30 tRNA, and four rRNA genes. The result of the phylogenetic analysis indicated that W. neoaurantiaca was related to W. villosa var. xanthioides and supported de Boer’s classification that W. compacta, W. longiligularis, W. neoaurantiaca, W. villosa, W. villosa var. xanthioides and Amomum krervanh belonged to the Wurfbainia Clade. Taylor & Francis 2021-06-30 /pmc/articles/PMC8253217/ /pubmed/34263033 http://dx.doi.org/10.1080/23802359.2021.1938722 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Chunyong
Wang, Yanqian
Wang, Yanfang
Li, Shuang
Li, Ge
Yan, Zhen
Zhang, Lixia
Qi, Jianjun
The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China
title The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China
title_full The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China
title_fullStr The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China
title_full_unstemmed The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China
title_short The complete chloroplast genome of Wurfbainia neoaurantiaca (Zingiberaceae: Zingiberea) from Yunnan Province, China
title_sort complete chloroplast genome of wurfbainia neoaurantiaca (zingiberaceae: zingiberea) from yunnan province, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253217/
https://www.ncbi.nlm.nih.gov/pubmed/34263033
http://dx.doi.org/10.1080/23802359.2021.1938722
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