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Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models

Peanut (Arachis hypogaea L.) is an important crop for United States agriculture and worldwide. Low soil moisture is a major constraint for production in all peanut growing regions with negative effects on yield quantity and quality. Leaf wilting is a visual symptom of low moisture stress used in bre...

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Autores principales: Sarkar, Sayantan, Ramsey, A. Ford, Cazenave, Alexandre-Brice, Balota, Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253229/
https://www.ncbi.nlm.nih.gov/pubmed/34220885
http://dx.doi.org/10.3389/fpls.2021.658621
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author Sarkar, Sayantan
Ramsey, A. Ford
Cazenave, Alexandre-Brice
Balota, Maria
author_facet Sarkar, Sayantan
Ramsey, A. Ford
Cazenave, Alexandre-Brice
Balota, Maria
author_sort Sarkar, Sayantan
collection PubMed
description Peanut (Arachis hypogaea L.) is an important crop for United States agriculture and worldwide. Low soil moisture is a major constraint for production in all peanut growing regions with negative effects on yield quantity and quality. Leaf wilting is a visual symptom of low moisture stress used in breeding to improve stress tolerance, but visual rating is slow when thousands of breeding lines are evaluated and can be subject to personnel scoring bias. Photogrammetry might be used instead. The objective of this article is to determine if color space indices derived from red-green-blue (RGB) images can accurately estimate leaf wilting for breeding selection and irrigation triggering in peanut production. RGB images were collected with a digital camera proximally and aerially by a unmanned aerial vehicle during 2018 and 2019. Visual rating was performed on the same days as image collection. Vegetation indices were intensity, hue, saturation, lightness, a(∗), b(∗), u(∗), v(∗), green area (GA), greener area (GGA), and crop senescence index (CSI). In particular, hue, a(∗), u(∗), GA, GGA, and CSI were significantly (p ≤ 0.0001) associated with leaf wilting. These indices were further used to train an ordinal logistic regression model for wilting estimation. This model had 90% accuracy when images were taken aerially and 99% when images were taken proximally. This article reports on a simple yet key aspect of peanut screening for tolerance to low soil moisture stress and uses novel, fast, cost-effective, and accurate RGB-derived models to estimate leaf wilting.
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spelling pubmed-82532292021-07-03 Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models Sarkar, Sayantan Ramsey, A. Ford Cazenave, Alexandre-Brice Balota, Maria Front Plant Sci Plant Science Peanut (Arachis hypogaea L.) is an important crop for United States agriculture and worldwide. Low soil moisture is a major constraint for production in all peanut growing regions with negative effects on yield quantity and quality. Leaf wilting is a visual symptom of low moisture stress used in breeding to improve stress tolerance, but visual rating is slow when thousands of breeding lines are evaluated and can be subject to personnel scoring bias. Photogrammetry might be used instead. The objective of this article is to determine if color space indices derived from red-green-blue (RGB) images can accurately estimate leaf wilting for breeding selection and irrigation triggering in peanut production. RGB images were collected with a digital camera proximally and aerially by a unmanned aerial vehicle during 2018 and 2019. Visual rating was performed on the same days as image collection. Vegetation indices were intensity, hue, saturation, lightness, a(∗), b(∗), u(∗), v(∗), green area (GA), greener area (GGA), and crop senescence index (CSI). In particular, hue, a(∗), u(∗), GA, GGA, and CSI were significantly (p ≤ 0.0001) associated with leaf wilting. These indices were further used to train an ordinal logistic regression model for wilting estimation. This model had 90% accuracy when images were taken aerially and 99% when images were taken proximally. This article reports on a simple yet key aspect of peanut screening for tolerance to low soil moisture stress and uses novel, fast, cost-effective, and accurate RGB-derived models to estimate leaf wilting. Frontiers Media S.A. 2021-06-18 /pmc/articles/PMC8253229/ /pubmed/34220885 http://dx.doi.org/10.3389/fpls.2021.658621 Text en Copyright © 2021 Sarkar, Ramsey, Cazenave and Balota. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Sarkar, Sayantan
Ramsey, A. Ford
Cazenave, Alexandre-Brice
Balota, Maria
Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models
title Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models
title_full Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models
title_fullStr Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models
title_full_unstemmed Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models
title_short Peanut Leaf Wilting Estimation From RGB Color Indices and Logistic Models
title_sort peanut leaf wilting estimation from rgb color indices and logistic models
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253229/
https://www.ncbi.nlm.nih.gov/pubmed/34220885
http://dx.doi.org/10.3389/fpls.2021.658621
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AT cazenavealexandrebrice peanutleafwiltingestimationfromrgbcolorindicesandlogisticmodels
AT balotamaria peanutleafwiltingestimationfromrgbcolorindicesandlogisticmodels