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Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer
Traditional histopathology performed by pathologists by the naked eye is insufficient for accurate and efficient diagnosis of bladder cancer (BCa). We collected 643 H&E‐stained BCa images from Shanghai General Hospital and The Cancer Genome Atlas (TCGA). We constructed and cross‐verified automat...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253293/ https://www.ncbi.nlm.nih.gov/pubmed/33931925 http://dx.doi.org/10.1111/cas.14927 |
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author | Chen, Siteng Jiang, Liren Zheng, Xinyi Shao, Jialiang Wang, Tao Zhang, Encheng Gao, Feng Wang, Xiang Zheng, Junhua |
author_facet | Chen, Siteng Jiang, Liren Zheng, Xinyi Shao, Jialiang Wang, Tao Zhang, Encheng Gao, Feng Wang, Xiang Zheng, Junhua |
author_sort | Chen, Siteng |
collection | PubMed |
description | Traditional histopathology performed by pathologists by the naked eye is insufficient for accurate and efficient diagnosis of bladder cancer (BCa). We collected 643 H&E‐stained BCa images from Shanghai General Hospital and The Cancer Genome Atlas (TCGA). We constructed and cross‐verified automatic diagnosis and prognosis models by performing a machine learning algorithm based on pathomics data. Our study indicated that high diagnostic efficiency of the machine learning‐based diagnosis model was observed in patients with BCa, with area under the curve (AUC) values of 96.3%, 89.2%, and 94.1% in the training cohort, test cohort, and external validation cohort, respectively. Our diagnosis model also performed well in distinguishing patients with BCa from patients with glandular cystitis, with an AUC value of 93.4% in the General cohort. Significant differences were found in overall survival in TCGA cohort (hazard ratio (HR) = 2.09, 95% confidence interval (CI): 1.56‐2.81, P < .0001) and the General cohort (HR = 5.32, 95% CI: 2.95‐9.59, P < .0001) comparing patients with BCa of high risk vs low risk stratified by risk score, which was proved to be an independent prognostic factor for BCa. The integration nomogram based on our risk score and clinicopathologic characters displayed higher prediction accuracy than current tumor stage/grade systems, with AUC values of 77.7%, 83.8%, and 81.3% for 1‐, 3‐, and 5‐y overall survival prediction of patients with BCa. However, prospective studies are still needed for further verifications. |
format | Online Article Text |
id | pubmed-8253293 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82532932021-07-13 Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer Chen, Siteng Jiang, Liren Zheng, Xinyi Shao, Jialiang Wang, Tao Zhang, Encheng Gao, Feng Wang, Xiang Zheng, Junhua Cancer Sci Original Articles Traditional histopathology performed by pathologists by the naked eye is insufficient for accurate and efficient diagnosis of bladder cancer (BCa). We collected 643 H&E‐stained BCa images from Shanghai General Hospital and The Cancer Genome Atlas (TCGA). We constructed and cross‐verified automatic diagnosis and prognosis models by performing a machine learning algorithm based on pathomics data. Our study indicated that high diagnostic efficiency of the machine learning‐based diagnosis model was observed in patients with BCa, with area under the curve (AUC) values of 96.3%, 89.2%, and 94.1% in the training cohort, test cohort, and external validation cohort, respectively. Our diagnosis model also performed well in distinguishing patients with BCa from patients with glandular cystitis, with an AUC value of 93.4% in the General cohort. Significant differences were found in overall survival in TCGA cohort (hazard ratio (HR) = 2.09, 95% confidence interval (CI): 1.56‐2.81, P < .0001) and the General cohort (HR = 5.32, 95% CI: 2.95‐9.59, P < .0001) comparing patients with BCa of high risk vs low risk stratified by risk score, which was proved to be an independent prognostic factor for BCa. The integration nomogram based on our risk score and clinicopathologic characters displayed higher prediction accuracy than current tumor stage/grade systems, with AUC values of 77.7%, 83.8%, and 81.3% for 1‐, 3‐, and 5‐y overall survival prediction of patients with BCa. However, prospective studies are still needed for further verifications. John Wiley and Sons Inc. 2021-05-05 2021-07 /pmc/articles/PMC8253293/ /pubmed/33931925 http://dx.doi.org/10.1111/cas.14927 Text en © 2021 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Original Articles Chen, Siteng Jiang, Liren Zheng, Xinyi Shao, Jialiang Wang, Tao Zhang, Encheng Gao, Feng Wang, Xiang Zheng, Junhua Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer |
title | Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer |
title_full | Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer |
title_fullStr | Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer |
title_full_unstemmed | Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer |
title_short | Clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer |
title_sort | clinical use of machine learning‐based pathomics signature for diagnosis and survival prediction of bladder cancer |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8253293/ https://www.ncbi.nlm.nih.gov/pubmed/33931925 http://dx.doi.org/10.1111/cas.14927 |
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