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COVID-19 lesion detection and segmentation–A deep learning method

PURPOSE: In this paper, we utilized deep learning methods to screen the positive COVID-19 cases in chest CT. Our primary goal is to supply rapid and precise assistance for disease surveillance on the medical imaging aspect. MATERIALS AND METHODS: Basing on deep learning, we combined semantic segment...

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Detalles Bibliográficos
Autores principales: Jingxin, Liu, Mengchao, Zhang, Yuchen, Liu, Jinglei, Cui, Yutong, Zhong, Zhong, Zhang, Lihui, Zu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8256684/
https://www.ncbi.nlm.nih.gov/pubmed/34237453
http://dx.doi.org/10.1016/j.ymeth.2021.07.001
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author Jingxin, Liu
Mengchao, Zhang
Yuchen, Liu
Jinglei, Cui
Yutong, Zhong
Zhong, Zhang
Lihui, Zu
author_facet Jingxin, Liu
Mengchao, Zhang
Yuchen, Liu
Jinglei, Cui
Yutong, Zhong
Zhong, Zhang
Lihui, Zu
author_sort Jingxin, Liu
collection PubMed
description PURPOSE: In this paper, we utilized deep learning methods to screen the positive COVID-19 cases in chest CT. Our primary goal is to supply rapid and precise assistance for disease surveillance on the medical imaging aspect. MATERIALS AND METHODS: Basing on deep learning, we combined semantic segmentation and object detection methods to study the lesion performance of COVID-19. We put forward a novel end-to-end model which takes advantage of the Spatio-temporal features. Furthermore, a segmentation model attached with a fully connected CRF was designed for a more effective ROI input. RESULTS: Our method showed a better performance across different metrics against the comparison models. Moreover, our strategy highlighted strong robustness for the processed augmented testing samples. CONCLUSION: The comprehensive fusion of Spatio-temporal correlations can exploit more valuable features for locating target regions, and this mechanism is friendly to detect tiny lesions. Although it remains in discrete form, the feature extracting in temporal dimension improves the precision of final prediction.
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spelling pubmed-82566842021-07-06 COVID-19 lesion detection and segmentation–A deep learning method Jingxin, Liu Mengchao, Zhang Yuchen, Liu Jinglei, Cui Yutong, Zhong Zhong, Zhang Lihui, Zu Methods Article PURPOSE: In this paper, we utilized deep learning methods to screen the positive COVID-19 cases in chest CT. Our primary goal is to supply rapid and precise assistance for disease surveillance on the medical imaging aspect. MATERIALS AND METHODS: Basing on deep learning, we combined semantic segmentation and object detection methods to study the lesion performance of COVID-19. We put forward a novel end-to-end model which takes advantage of the Spatio-temporal features. Furthermore, a segmentation model attached with a fully connected CRF was designed for a more effective ROI input. RESULTS: Our method showed a better performance across different metrics against the comparison models. Moreover, our strategy highlighted strong robustness for the processed augmented testing samples. CONCLUSION: The comprehensive fusion of Spatio-temporal correlations can exploit more valuable features for locating target regions, and this mechanism is friendly to detect tiny lesions. Although it remains in discrete form, the feature extracting in temporal dimension improves the precision of final prediction. Elsevier Inc. 2022-06 2021-07-05 /pmc/articles/PMC8256684/ /pubmed/34237453 http://dx.doi.org/10.1016/j.ymeth.2021.07.001 Text en © 2021 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Jingxin, Liu
Mengchao, Zhang
Yuchen, Liu
Jinglei, Cui
Yutong, Zhong
Zhong, Zhang
Lihui, Zu
COVID-19 lesion detection and segmentation–A deep learning method
title COVID-19 lesion detection and segmentation–A deep learning method
title_full COVID-19 lesion detection and segmentation–A deep learning method
title_fullStr COVID-19 lesion detection and segmentation–A deep learning method
title_full_unstemmed COVID-19 lesion detection and segmentation–A deep learning method
title_short COVID-19 lesion detection and segmentation–A deep learning method
title_sort covid-19 lesion detection and segmentation–a deep learning method
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8256684/
https://www.ncbi.nlm.nih.gov/pubmed/34237453
http://dx.doi.org/10.1016/j.ymeth.2021.07.001
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