Cargando…

Relativistic Hirshfeld atom refinement of an organo-gold(I) compound

The main goal of this study is the validation of relativistic Hirshfeld atom refinement (HAR) as implemented in Tonto for high-resolution X-ray diffraction datasets of an organo-gold(I) compound. The influence of the relativistic effects on statistical parameters, geometries and electron density pro...

Descripción completa

Detalles Bibliográficos
Autores principales: Pawlędzio, Sylwia, Malinska, Maura, Woińska, Magdalena, Wojciechowski, Jakub, Andrade Malaspina, Lorraine, Kleemiss, Florian, Grabowsky, Simon, Woźniak, Krzysztof
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8256711/
https://www.ncbi.nlm.nih.gov/pubmed/34258009
http://dx.doi.org/10.1107/S2052252521004541
_version_ 1783718152506441728
author Pawlędzio, Sylwia
Malinska, Maura
Woińska, Magdalena
Wojciechowski, Jakub
Andrade Malaspina, Lorraine
Kleemiss, Florian
Grabowsky, Simon
Woźniak, Krzysztof
author_facet Pawlędzio, Sylwia
Malinska, Maura
Woińska, Magdalena
Wojciechowski, Jakub
Andrade Malaspina, Lorraine
Kleemiss, Florian
Grabowsky, Simon
Woźniak, Krzysztof
author_sort Pawlędzio, Sylwia
collection PubMed
description The main goal of this study is the validation of relativistic Hirshfeld atom refinement (HAR) as implemented in Tonto for high-resolution X-ray diffraction datasets of an organo-gold(I) compound. The influence of the relativistic effects on statistical parameters, geometries and electron density properties was analyzed and compared with the influence of electron correlation and anharmonic atomic motions. Recent work in this field has indicated the importance of relativistic effects in the static electron density distribution of organo-mercury compounds. This study confirms that differences in electron density due to relativistic effects are also of significant magnitude for organo-gold compounds. Relativistic effects dominate not only the core region of the gold atom, but also influence the electron density in the valence and bonding region, which has measurable consequences for the HAR refinement model parameters. To study the effects of anharmonic motion on the electron density distribution, dynamic electron density difference maps were constructed. Unlike relativistic and electron correlation effects, the effects of anharmonic nuclear motion are mostly observed in the core area of the gold atom.
format Online
Article
Text
id pubmed-8256711
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-82567112021-07-12 Relativistic Hirshfeld atom refinement of an organo-gold(I) compound Pawlędzio, Sylwia Malinska, Maura Woińska, Magdalena Wojciechowski, Jakub Andrade Malaspina, Lorraine Kleemiss, Florian Grabowsky, Simon Woźniak, Krzysztof IUCrJ Research Papers The main goal of this study is the validation of relativistic Hirshfeld atom refinement (HAR) as implemented in Tonto for high-resolution X-ray diffraction datasets of an organo-gold(I) compound. The influence of the relativistic effects on statistical parameters, geometries and electron density properties was analyzed and compared with the influence of electron correlation and anharmonic atomic motions. Recent work in this field has indicated the importance of relativistic effects in the static electron density distribution of organo-mercury compounds. This study confirms that differences in electron density due to relativistic effects are also of significant magnitude for organo-gold compounds. Relativistic effects dominate not only the core region of the gold atom, but also influence the electron density in the valence and bonding region, which has measurable consequences for the HAR refinement model parameters. To study the effects of anharmonic motion on the electron density distribution, dynamic electron density difference maps were constructed. Unlike relativistic and electron correlation effects, the effects of anharmonic nuclear motion are mostly observed in the core area of the gold atom. International Union of Crystallography 2021-05-26 /pmc/articles/PMC8256711/ /pubmed/34258009 http://dx.doi.org/10.1107/S2052252521004541 Text en © Sylwia Pawlędzio et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Pawlędzio, Sylwia
Malinska, Maura
Woińska, Magdalena
Wojciechowski, Jakub
Andrade Malaspina, Lorraine
Kleemiss, Florian
Grabowsky, Simon
Woźniak, Krzysztof
Relativistic Hirshfeld atom refinement of an organo-gold(I) compound
title Relativistic Hirshfeld atom refinement of an organo-gold(I) compound
title_full Relativistic Hirshfeld atom refinement of an organo-gold(I) compound
title_fullStr Relativistic Hirshfeld atom refinement of an organo-gold(I) compound
title_full_unstemmed Relativistic Hirshfeld atom refinement of an organo-gold(I) compound
title_short Relativistic Hirshfeld atom refinement of an organo-gold(I) compound
title_sort relativistic hirshfeld atom refinement of an organo-gold(i) compound
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8256711/
https://www.ncbi.nlm.nih.gov/pubmed/34258009
http://dx.doi.org/10.1107/S2052252521004541
work_keys_str_mv AT pawledziosylwia relativistichirshfeldatomrefinementofanorganogoldicompound
AT malinskamaura relativistichirshfeldatomrefinementofanorganogoldicompound
AT woinskamagdalena relativistichirshfeldatomrefinementofanorganogoldicompound
AT wojciechowskijakub relativistichirshfeldatomrefinementofanorganogoldicompound
AT andrademalaspinalorraine relativistichirshfeldatomrefinementofanorganogoldicompound
AT kleemissflorian relativistichirshfeldatomrefinementofanorganogoldicompound
AT grabowskysimon relativistichirshfeldatomrefinementofanorganogoldicompound
AT wozniakkrzysztof relativistichirshfeldatomrefinementofanorganogoldicompound