Cargando…

The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma

TP53 mutation (TP53(MUT)) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53(MUT) regulates the correlation between ESCA and prognosis...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Hongpan, Huang, Zheng, Song, Yangguang, Yang, Zhihao, Shi, Qi, Wang, Kaige, Zhang, Zhiyu, Liu, Zheng, Cui, Xiaobin, Li, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8256894/
https://www.ncbi.nlm.nih.gov/pubmed/34234806
http://dx.doi.org/10.3389/fgene.2021.607238
_version_ 1783718189225476096
author Zhang, Hongpan
Huang, Zheng
Song, Yangguang
Yang, Zhihao
Shi, Qi
Wang, Kaige
Zhang, Zhiyu
Liu, Zheng
Cui, Xiaobin
Li, Feng
author_facet Zhang, Hongpan
Huang, Zheng
Song, Yangguang
Yang, Zhihao
Shi, Qi
Wang, Kaige
Zhang, Zhiyu
Liu, Zheng
Cui, Xiaobin
Li, Feng
author_sort Zhang, Hongpan
collection PubMed
description TP53 mutation (TP53(MUT)) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53(MUT) regulates the correlation between ESCA and prognosis have not been sufficiently studied. Here, in the current research, we constructed a TP53(MUT)-related signature to predict the prognosis of patients with esophageal cancer and successfully verified this model in patients in the TP53 mutant group, esophageal squamous cell carcinoma group, and adenocarcinoma group. The risk scores proved to be better independent prognostic factors than clinical features, and prognostic features were combined with other clinical features to establish a convincing nomogram to predict overall survival from 1 to 3 years. In addition, we further predicted the tumor immune cell infiltration, chemical drugs, and immunotherapy responses between the high-risk group and low risk group. Finally, the gene expression of the seven-gene signature (AP002478.1, BHLHA15, FFAR2, IGFBP1, KCTD8, PHYHD1, and SLC26A9) can provide personalized prognosis prediction and insights into new treatments.
format Online
Article
Text
id pubmed-8256894
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-82568942021-07-06 The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma Zhang, Hongpan Huang, Zheng Song, Yangguang Yang, Zhihao Shi, Qi Wang, Kaige Zhang, Zhiyu Liu, Zheng Cui, Xiaobin Li, Feng Front Genet Genetics TP53 mutation (TP53(MUT)) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53(MUT) regulates the correlation between ESCA and prognosis have not been sufficiently studied. Here, in the current research, we constructed a TP53(MUT)-related signature to predict the prognosis of patients with esophageal cancer and successfully verified this model in patients in the TP53 mutant group, esophageal squamous cell carcinoma group, and adenocarcinoma group. The risk scores proved to be better independent prognostic factors than clinical features, and prognostic features were combined with other clinical features to establish a convincing nomogram to predict overall survival from 1 to 3 years. In addition, we further predicted the tumor immune cell infiltration, chemical drugs, and immunotherapy responses between the high-risk group and low risk group. Finally, the gene expression of the seven-gene signature (AP002478.1, BHLHA15, FFAR2, IGFBP1, KCTD8, PHYHD1, and SLC26A9) can provide personalized prognosis prediction and insights into new treatments. Frontiers Media S.A. 2021-06-16 /pmc/articles/PMC8256894/ /pubmed/34234806 http://dx.doi.org/10.3389/fgene.2021.607238 Text en Copyright © 2021 Zhang, Huang, Song, Yang, Shi, Wang, Zhang, Liu, Cui and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Zhang, Hongpan
Huang, Zheng
Song, Yangguang
Yang, Zhihao
Shi, Qi
Wang, Kaige
Zhang, Zhiyu
Liu, Zheng
Cui, Xiaobin
Li, Feng
The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_full The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_fullStr The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_full_unstemmed The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_short The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_sort tp53-related signature predicts immune cell infiltration, therapeutic response, and prognosis in patients with esophageal carcinoma
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8256894/
https://www.ncbi.nlm.nih.gov/pubmed/34234806
http://dx.doi.org/10.3389/fgene.2021.607238
work_keys_str_mv AT zhanghongpan thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT huangzheng thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT songyangguang thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT yangzhihao thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT shiqi thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT wangkaige thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT zhangzhiyu thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT liuzheng thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT cuixiaobin thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT lifeng thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT zhanghongpan tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT huangzheng tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT songyangguang tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT yangzhihao tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT shiqi tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT wangkaige tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT zhangzhiyu tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT liuzheng tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT cuixiaobin tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma
AT lifeng tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma