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Accurate long-range forecasting of COVID-19 mortality in the USA

The need for improved models that can accurately predict COVID-19 dynamics is vital to managing the pandemic and its consequences. We use machine learning techniques to design an adaptive learner that, based on epidemiological data available at any given time, produces a model that accurately foreca...

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Autores principales: Ramazi, Pouria, Haratian, Arezoo, Meghdadi, Maryam, Mari Oriyad, Arash, Lewis, Mark A., Maleki, Zeinab, Vega, Roberto, Wang, Hao, Wishart, David S., Greiner, Russell
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8257700/
https://www.ncbi.nlm.nih.gov/pubmed/34226584
http://dx.doi.org/10.1038/s41598-021-91365-2
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author Ramazi, Pouria
Haratian, Arezoo
Meghdadi, Maryam
Mari Oriyad, Arash
Lewis, Mark A.
Maleki, Zeinab
Vega, Roberto
Wang, Hao
Wishart, David S.
Greiner, Russell
author_facet Ramazi, Pouria
Haratian, Arezoo
Meghdadi, Maryam
Mari Oriyad, Arash
Lewis, Mark A.
Maleki, Zeinab
Vega, Roberto
Wang, Hao
Wishart, David S.
Greiner, Russell
author_sort Ramazi, Pouria
collection PubMed
description The need for improved models that can accurately predict COVID-19 dynamics is vital to managing the pandemic and its consequences. We use machine learning techniques to design an adaptive learner that, based on epidemiological data available at any given time, produces a model that accurately forecasts the number of reported COVID-19 deaths and cases in the United States, up to 10 weeks into the future with a mean absolute percentage error of 9%. In addition to being the most accurate long-range COVID predictor so far developed, it captures the observed periodicity in daily reported numbers. Its effectiveness is based on three design features: (1) producing different model parameters to predict the number of COVID deaths (and cases) from each time and for a given number of weeks into the future, (2) systematically searching over the available covariates and their historical values to find an effective combination, and (3) training the model using “last-fold partitioning”, where each proposed model is validated on only the last instance of the training dataset, rather than being cross-validated. Assessments against many other published COVID predictors show that this predictor is 19–48% more accurate.
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spelling pubmed-82577002021-07-08 Accurate long-range forecasting of COVID-19 mortality in the USA Ramazi, Pouria Haratian, Arezoo Meghdadi, Maryam Mari Oriyad, Arash Lewis, Mark A. Maleki, Zeinab Vega, Roberto Wang, Hao Wishart, David S. Greiner, Russell Sci Rep Article The need for improved models that can accurately predict COVID-19 dynamics is vital to managing the pandemic and its consequences. We use machine learning techniques to design an adaptive learner that, based on epidemiological data available at any given time, produces a model that accurately forecasts the number of reported COVID-19 deaths and cases in the United States, up to 10 weeks into the future with a mean absolute percentage error of 9%. In addition to being the most accurate long-range COVID predictor so far developed, it captures the observed periodicity in daily reported numbers. Its effectiveness is based on three design features: (1) producing different model parameters to predict the number of COVID deaths (and cases) from each time and for a given number of weeks into the future, (2) systematically searching over the available covariates and their historical values to find an effective combination, and (3) training the model using “last-fold partitioning”, where each proposed model is validated on only the last instance of the training dataset, rather than being cross-validated. Assessments against many other published COVID predictors show that this predictor is 19–48% more accurate. Nature Publishing Group UK 2021-07-05 /pmc/articles/PMC8257700/ /pubmed/34226584 http://dx.doi.org/10.1038/s41598-021-91365-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ramazi, Pouria
Haratian, Arezoo
Meghdadi, Maryam
Mari Oriyad, Arash
Lewis, Mark A.
Maleki, Zeinab
Vega, Roberto
Wang, Hao
Wishart, David S.
Greiner, Russell
Accurate long-range forecasting of COVID-19 mortality in the USA
title Accurate long-range forecasting of COVID-19 mortality in the USA
title_full Accurate long-range forecasting of COVID-19 mortality in the USA
title_fullStr Accurate long-range forecasting of COVID-19 mortality in the USA
title_full_unstemmed Accurate long-range forecasting of COVID-19 mortality in the USA
title_short Accurate long-range forecasting of COVID-19 mortality in the USA
title_sort accurate long-range forecasting of covid-19 mortality in the usa
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8257700/
https://www.ncbi.nlm.nih.gov/pubmed/34226584
http://dx.doi.org/10.1038/s41598-021-91365-2
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