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Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial
BACKGROUND AND PURPOSE: Rapid genotyping is useful for guiding early antiplatelet therapy in patients with high-risk nondisabling ischaemic cerebrovascular events (HR-NICE). Conventional genetic testing methods used in CYP2C19 genotype-guided antiplatelet therapy for patients with HR-NICE did not sa...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BMJ Publishing Group
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258065/ https://www.ncbi.nlm.nih.gov/pubmed/33952669 http://dx.doi.org/10.1136/svn-2021-000874 |
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author | Meng, Xia Wang, Anxin Zhang, Guojun Niu, Siying Li, Wei Han, Sifei Fang, Fang Zhao, Xingquan Dong, Kehui Jin, Zening Zheng, Huaguang Chen, Kelin Li, Hao Yang, Chengyuan Wang, Yongjun |
author_facet | Meng, Xia Wang, Anxin Zhang, Guojun Niu, Siying Li, Wei Han, Sifei Fang, Fang Zhao, Xingquan Dong, Kehui Jin, Zening Zheng, Huaguang Chen, Kelin Li, Hao Yang, Chengyuan Wang, Yongjun |
author_sort | Meng, Xia |
collection | PubMed |
description | BACKGROUND AND PURPOSE: Rapid genotyping is useful for guiding early antiplatelet therapy in patients with high-risk nondisabling ischaemic cerebrovascular events (HR-NICE). Conventional genetic testing methods used in CYP2C19 genotype-guided antiplatelet therapy for patients with HR-NICE did not satisfy the needs of the Clopidogrel in High-Risk Patients with Acute Nondisabling Cerebrovascular Events (CHANCE)-2 trial. Therefore, we developed the rapid-genotyping GMEX (point-of-care) system to meet the needs of the CHANCE-2 trial. METHODS: Healthy individuals and patients with history of cardiovascular diseases (n=408) were enrolled from six centres of the CHANCE-2 trial. We compared the laboratory-based genomic test results with Sanger sequencing test results for accuracy verification. Next, we demonstrated the accuracy, timeliness and clinical operability of the GMEX system compared with laboratory-based technology (YZY Kit) to verify whether the GMEX system satisfies the needs of the CHANCE-2 trial. RESULTS: Genotypes reported by the GMEX system showed 100% agreement with those determined by using the YZY Kit and Sanger sequencing for all three CYP2C19 alleles (*2, *3 and *17) tested. The average result’s turnaround times for the GMEX and YZY Kit methods were 85.0 (IQR: 85.0–86.0) and 1630.0 (IQR: 354.0–7594.0) min (p<0.001), respectively. CONCLUSIONS: Our data suggest that the GMEX system is a reliable and feasible point-of-care system for rapid CYP2C19 genotyping for the CHANCE-2 trial or related clinical and research applications. |
format | Online Article Text |
id | pubmed-8258065 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BMJ Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-82580652021-07-16 Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial Meng, Xia Wang, Anxin Zhang, Guojun Niu, Siying Li, Wei Han, Sifei Fang, Fang Zhao, Xingquan Dong, Kehui Jin, Zening Zheng, Huaguang Chen, Kelin Li, Hao Yang, Chengyuan Wang, Yongjun Stroke Vasc Neurol Original Research BACKGROUND AND PURPOSE: Rapid genotyping is useful for guiding early antiplatelet therapy in patients with high-risk nondisabling ischaemic cerebrovascular events (HR-NICE). Conventional genetic testing methods used in CYP2C19 genotype-guided antiplatelet therapy for patients with HR-NICE did not satisfy the needs of the Clopidogrel in High-Risk Patients with Acute Nondisabling Cerebrovascular Events (CHANCE)-2 trial. Therefore, we developed the rapid-genotyping GMEX (point-of-care) system to meet the needs of the CHANCE-2 trial. METHODS: Healthy individuals and patients with history of cardiovascular diseases (n=408) were enrolled from six centres of the CHANCE-2 trial. We compared the laboratory-based genomic test results with Sanger sequencing test results for accuracy verification. Next, we demonstrated the accuracy, timeliness and clinical operability of the GMEX system compared with laboratory-based technology (YZY Kit) to verify whether the GMEX system satisfies the needs of the CHANCE-2 trial. RESULTS: Genotypes reported by the GMEX system showed 100% agreement with those determined by using the YZY Kit and Sanger sequencing for all three CYP2C19 alleles (*2, *3 and *17) tested. The average result’s turnaround times for the GMEX and YZY Kit methods were 85.0 (IQR: 85.0–86.0) and 1630.0 (IQR: 354.0–7594.0) min (p<0.001), respectively. CONCLUSIONS: Our data suggest that the GMEX system is a reliable and feasible point-of-care system for rapid CYP2C19 genotyping for the CHANCE-2 trial or related clinical and research applications. BMJ Publishing Group 2021-05-05 /pmc/articles/PMC8258065/ /pubmed/33952669 http://dx.doi.org/10.1136/svn-2021-000874 Text en © Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) . |
spellingShingle | Original Research Meng, Xia Wang, Anxin Zhang, Guojun Niu, Siying Li, Wei Han, Sifei Fang, Fang Zhao, Xingquan Dong, Kehui Jin, Zening Zheng, Huaguang Chen, Kelin Li, Hao Yang, Chengyuan Wang, Yongjun Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial |
title | Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial |
title_full | Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial |
title_fullStr | Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial |
title_full_unstemmed | Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial |
title_short | Analytical validation of GMEX rapid point-of-care CYP2C19 genotyping system for the CHANCE-2 trial |
title_sort | analytical validation of gmex rapid point-of-care cyp2c19 genotyping system for the chance-2 trial |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258065/ https://www.ncbi.nlm.nih.gov/pubmed/33952669 http://dx.doi.org/10.1136/svn-2021-000874 |
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