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Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides

Altered copy number of certain highly repetitive regions of the genome, such as satellite DNA within heterochromatin and ribosomal RNA loci (rDNA), is hypothesized to help safeguard the genome against damage derived from external stressors. We quantified copy number of the 18S rDNA and a pericentrom...

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Autores principales: Jernfors, Toni, Danforth, John, Kesäniemi, Jenni, Lavrinienko, Anton, Tukalenko, Eugene, Fajkus, Jiří, Dvořáčková, Martina, Mappes, Tapio, Watts, Phillip C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258220/
https://www.ncbi.nlm.nih.gov/pubmed/34257925
http://dx.doi.org/10.1002/ece3.7684
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author Jernfors, Toni
Danforth, John
Kesäniemi, Jenni
Lavrinienko, Anton
Tukalenko, Eugene
Fajkus, Jiří
Dvořáčková, Martina
Mappes, Tapio
Watts, Phillip C.
author_facet Jernfors, Toni
Danforth, John
Kesäniemi, Jenni
Lavrinienko, Anton
Tukalenko, Eugene
Fajkus, Jiří
Dvořáčková, Martina
Mappes, Tapio
Watts, Phillip C.
author_sort Jernfors, Toni
collection PubMed
description Altered copy number of certain highly repetitive regions of the genome, such as satellite DNA within heterochromatin and ribosomal RNA loci (rDNA), is hypothesized to help safeguard the genome against damage derived from external stressors. We quantified copy number of the 18S rDNA and a pericentromeric satellite DNA (Msat‐160) in bank voles (Myodes glareolus) inhabiting the Chernobyl Exclusion Zone (CEZ), an area that is contaminated by radionuclides and where organisms are exposed to elevated levels of ionizing radiation. We found a significant increase in 18S rDNA and Msat‐160 content in the genomes of bank voles from contaminated locations within the CEZ compared with animals from uncontaminated locations. Moreover, 18S rDNA and Msat‐160 copy number were positively correlated in the genomes of bank voles from uncontaminated, but not in the genomes of animals inhabiting contaminated, areas. These results show the capacity for local‐scale geographic variation in genome architecture and are consistent with the genomic safeguard hypothesis. Disruption of cellular processes related to genomic stability appears to be a hallmark effect in bank voles inhabiting areas contaminated by radionuclides.
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spelling pubmed-82582202021-07-12 Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides Jernfors, Toni Danforth, John Kesäniemi, Jenni Lavrinienko, Anton Tukalenko, Eugene Fajkus, Jiří Dvořáčková, Martina Mappes, Tapio Watts, Phillip C. Ecol Evol Original Research Altered copy number of certain highly repetitive regions of the genome, such as satellite DNA within heterochromatin and ribosomal RNA loci (rDNA), is hypothesized to help safeguard the genome against damage derived from external stressors. We quantified copy number of the 18S rDNA and a pericentromeric satellite DNA (Msat‐160) in bank voles (Myodes glareolus) inhabiting the Chernobyl Exclusion Zone (CEZ), an area that is contaminated by radionuclides and where organisms are exposed to elevated levels of ionizing radiation. We found a significant increase in 18S rDNA and Msat‐160 content in the genomes of bank voles from contaminated locations within the CEZ compared with animals from uncontaminated locations. Moreover, 18S rDNA and Msat‐160 copy number were positively correlated in the genomes of bank voles from uncontaminated, but not in the genomes of animals inhabiting contaminated, areas. These results show the capacity for local‐scale geographic variation in genome architecture and are consistent with the genomic safeguard hypothesis. Disruption of cellular processes related to genomic stability appears to be a hallmark effect in bank voles inhabiting areas contaminated by radionuclides. John Wiley and Sons Inc. 2021-05-25 /pmc/articles/PMC8258220/ /pubmed/34257925 http://dx.doi.org/10.1002/ece3.7684 Text en © 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Jernfors, Toni
Danforth, John
Kesäniemi, Jenni
Lavrinienko, Anton
Tukalenko, Eugene
Fajkus, Jiří
Dvořáčková, Martina
Mappes, Tapio
Watts, Phillip C.
Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides
title Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides
title_full Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides
title_fullStr Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides
title_full_unstemmed Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides
title_short Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides
title_sort expansion of rdna and pericentromere satellite repeats in the genomes of bank voles myodes glareolus exposed to environmental radionuclides
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258220/
https://www.ncbi.nlm.nih.gov/pubmed/34257925
http://dx.doi.org/10.1002/ece3.7684
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