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Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides
Altered copy number of certain highly repetitive regions of the genome, such as satellite DNA within heterochromatin and ribosomal RNA loci (rDNA), is hypothesized to help safeguard the genome against damage derived from external stressors. We quantified copy number of the 18S rDNA and a pericentrom...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258220/ https://www.ncbi.nlm.nih.gov/pubmed/34257925 http://dx.doi.org/10.1002/ece3.7684 |
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author | Jernfors, Toni Danforth, John Kesäniemi, Jenni Lavrinienko, Anton Tukalenko, Eugene Fajkus, Jiří Dvořáčková, Martina Mappes, Tapio Watts, Phillip C. |
author_facet | Jernfors, Toni Danforth, John Kesäniemi, Jenni Lavrinienko, Anton Tukalenko, Eugene Fajkus, Jiří Dvořáčková, Martina Mappes, Tapio Watts, Phillip C. |
author_sort | Jernfors, Toni |
collection | PubMed |
description | Altered copy number of certain highly repetitive regions of the genome, such as satellite DNA within heterochromatin and ribosomal RNA loci (rDNA), is hypothesized to help safeguard the genome against damage derived from external stressors. We quantified copy number of the 18S rDNA and a pericentromeric satellite DNA (Msat‐160) in bank voles (Myodes glareolus) inhabiting the Chernobyl Exclusion Zone (CEZ), an area that is contaminated by radionuclides and where organisms are exposed to elevated levels of ionizing radiation. We found a significant increase in 18S rDNA and Msat‐160 content in the genomes of bank voles from contaminated locations within the CEZ compared with animals from uncontaminated locations. Moreover, 18S rDNA and Msat‐160 copy number were positively correlated in the genomes of bank voles from uncontaminated, but not in the genomes of animals inhabiting contaminated, areas. These results show the capacity for local‐scale geographic variation in genome architecture and are consistent with the genomic safeguard hypothesis. Disruption of cellular processes related to genomic stability appears to be a hallmark effect in bank voles inhabiting areas contaminated by radionuclides. |
format | Online Article Text |
id | pubmed-8258220 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82582202021-07-12 Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides Jernfors, Toni Danforth, John Kesäniemi, Jenni Lavrinienko, Anton Tukalenko, Eugene Fajkus, Jiří Dvořáčková, Martina Mappes, Tapio Watts, Phillip C. Ecol Evol Original Research Altered copy number of certain highly repetitive regions of the genome, such as satellite DNA within heterochromatin and ribosomal RNA loci (rDNA), is hypothesized to help safeguard the genome against damage derived from external stressors. We quantified copy number of the 18S rDNA and a pericentromeric satellite DNA (Msat‐160) in bank voles (Myodes glareolus) inhabiting the Chernobyl Exclusion Zone (CEZ), an area that is contaminated by radionuclides and where organisms are exposed to elevated levels of ionizing radiation. We found a significant increase in 18S rDNA and Msat‐160 content in the genomes of bank voles from contaminated locations within the CEZ compared with animals from uncontaminated locations. Moreover, 18S rDNA and Msat‐160 copy number were positively correlated in the genomes of bank voles from uncontaminated, but not in the genomes of animals inhabiting contaminated, areas. These results show the capacity for local‐scale geographic variation in genome architecture and are consistent with the genomic safeguard hypothesis. Disruption of cellular processes related to genomic stability appears to be a hallmark effect in bank voles inhabiting areas contaminated by radionuclides. John Wiley and Sons Inc. 2021-05-25 /pmc/articles/PMC8258220/ /pubmed/34257925 http://dx.doi.org/10.1002/ece3.7684 Text en © 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Jernfors, Toni Danforth, John Kesäniemi, Jenni Lavrinienko, Anton Tukalenko, Eugene Fajkus, Jiří Dvořáčková, Martina Mappes, Tapio Watts, Phillip C. Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides |
title | Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides |
title_full | Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides |
title_fullStr | Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides |
title_full_unstemmed | Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides |
title_short | Expansion of rDNA and pericentromere satellite repeats in the genomes of bank voles Myodes glareolus exposed to environmental radionuclides |
title_sort | expansion of rdna and pericentromere satellite repeats in the genomes of bank voles myodes glareolus exposed to environmental radionuclides |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258220/ https://www.ncbi.nlm.nih.gov/pubmed/34257925 http://dx.doi.org/10.1002/ece3.7684 |
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