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Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images

Literature survey shows that convolutional neural network (CNN)-based pretrained models have been largely used for CoronaVirus Disease 2019 (COVID-19) classification using chest X-ray (CXR) and computed tomography (CT) datasets. However, most of the methods have used a smaller number of data samples...

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Autores principales: Ravi, Vinayakumar, Narasimhan, Harini, Chakraborty, Chinmay, Pham, Tuan D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258271/
https://www.ncbi.nlm.nih.gov/pubmed/34248292
http://dx.doi.org/10.1007/s00530-021-00826-1
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author Ravi, Vinayakumar
Narasimhan, Harini
Chakraborty, Chinmay
Pham, Tuan D.
author_facet Ravi, Vinayakumar
Narasimhan, Harini
Chakraborty, Chinmay
Pham, Tuan D.
author_sort Ravi, Vinayakumar
collection PubMed
description Literature survey shows that convolutional neural network (CNN)-based pretrained models have been largely used for CoronaVirus Disease 2019 (COVID-19) classification using chest X-ray (CXR) and computed tomography (CT) datasets. However, most of the methods have used a smaller number of data samples for both CT and CXR datasets for training, validation, and testing. As a result, the model might have shown good performance during testing, but this type of model will not be more effective on unseen COVID-19 data samples. Generalization is an important term to be considered while designing a classifier that can perform well on completely unseen datasets. Here, this work proposes a large-scale learning with stacked ensemble meta-classifier and deep learning-based feature fusion approach for COVID-19 classification. The features from the penultimate layer (global average pooling) of EfficientNet-based pretrained models were extracted and the dimensionality of the extracted features reduced using kernel principal component analysis (PCA). Next, a feature fusion approach was employed to merge the features of various extracted features. Finally, a stacked ensemble meta-classifier-based approach was used for classification. It is a two-stage approach. In the first stage, random forest and support vector machine (SVM) were applied for prediction, then aggregated and fed into the second stage. The second stage includes logistic regression classifier that classifies the data sample of CT and CXR into either COVID-19 or Non-COVID-19. The proposed model was tested using large CT and CXR datasets, which are publicly available. The performance of the proposed model was compared with various existing CNN-based pretrained models. The proposed model outperformed the existing methods and can be used as a tool for point-of-care diagnosis by healthcare professionals.
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spelling pubmed-82582712021-07-06 Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images Ravi, Vinayakumar Narasimhan, Harini Chakraborty, Chinmay Pham, Tuan D. Multimed Syst Special Issue Paper Literature survey shows that convolutional neural network (CNN)-based pretrained models have been largely used for CoronaVirus Disease 2019 (COVID-19) classification using chest X-ray (CXR) and computed tomography (CT) datasets. However, most of the methods have used a smaller number of data samples for both CT and CXR datasets for training, validation, and testing. As a result, the model might have shown good performance during testing, but this type of model will not be more effective on unseen COVID-19 data samples. Generalization is an important term to be considered while designing a classifier that can perform well on completely unseen datasets. Here, this work proposes a large-scale learning with stacked ensemble meta-classifier and deep learning-based feature fusion approach for COVID-19 classification. The features from the penultimate layer (global average pooling) of EfficientNet-based pretrained models were extracted and the dimensionality of the extracted features reduced using kernel principal component analysis (PCA). Next, a feature fusion approach was employed to merge the features of various extracted features. Finally, a stacked ensemble meta-classifier-based approach was used for classification. It is a two-stage approach. In the first stage, random forest and support vector machine (SVM) were applied for prediction, then aggregated and fed into the second stage. The second stage includes logistic regression classifier that classifies the data sample of CT and CXR into either COVID-19 or Non-COVID-19. The proposed model was tested using large CT and CXR datasets, which are publicly available. The performance of the proposed model was compared with various existing CNN-based pretrained models. The proposed model outperformed the existing methods and can be used as a tool for point-of-care diagnosis by healthcare professionals. Springer Berlin Heidelberg 2021-07-06 2022 /pmc/articles/PMC8258271/ /pubmed/34248292 http://dx.doi.org/10.1007/s00530-021-00826-1 Text en © The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Special Issue Paper
Ravi, Vinayakumar
Narasimhan, Harini
Chakraborty, Chinmay
Pham, Tuan D.
Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images
title Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images
title_full Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images
title_fullStr Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images
title_full_unstemmed Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images
title_short Deep learning-based meta-classifier approach for COVID-19 classification using CT scan and chest X-ray images
title_sort deep learning-based meta-classifier approach for covid-19 classification using ct scan and chest x-ray images
topic Special Issue Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8258271/
https://www.ncbi.nlm.nih.gov/pubmed/34248292
http://dx.doi.org/10.1007/s00530-021-00826-1
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