Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound

An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73 Mb, N50 of 4.60 Mb, an...

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Detalles Bibliográficos
Autores principales: Park, Sook-Young, Jeon, Jongbum, Kim, Jung A, Jeon, Mi Jin, Yu, Nan Hee, Kim, Seulbi, Park, Ae Ran, Kim, Jin-Cheol, Lee, Yerim, Kim, Youngmin, Choi, Eu Ddeum, Jeong, Min-Hye, Lee, Yong-Hwan, Kim, Soonok
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Research Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8259839/
https://www.ncbi.nlm.nih.gov/pubmed/34290553
http://dx.doi.org/10.1080/12298093.2021.1914360
Descripción
Sumario:An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73 Mb, N50 of 4.60 Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified out of 13,730 gene models predicted.

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