Cargando…

The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)

Genomic size variation has long been a focus for biologists. However, due to the lack of genome size data, the mechanisms behind this variation and the biological significance of insect genome size are rarely studied systematically. The detailed taxonomy and phylogeny of the Ensifera, as well as the...

Descripción completa

Detalles Bibliográficos
Autores principales: Yuan, Hao, Huang, Yuan, Mao, Ying, Zhang, Nan, Nie, Yimeng, Zhang, Xue, Zhou, Yafu, Mao, Shaoli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8261143/
https://www.ncbi.nlm.nih.gov/pubmed/34249107
http://dx.doi.org/10.3389/fgene.2021.693541
_version_ 1783718953455976448
author Yuan, Hao
Huang, Yuan
Mao, Ying
Zhang, Nan
Nie, Yimeng
Zhang, Xue
Zhou, Yafu
Mao, Shaoli
author_facet Yuan, Hao
Huang, Yuan
Mao, Ying
Zhang, Nan
Nie, Yimeng
Zhang, Xue
Zhou, Yafu
Mao, Shaoli
author_sort Yuan, Hao
collection PubMed
description Genomic size variation has long been a focus for biologists. However, due to the lack of genome size data, the mechanisms behind this variation and the biological significance of insect genome size are rarely studied systematically. The detailed taxonomy and phylogeny of the Ensifera, as well as the extensive documentation concerning their morphological, ecological, behavioral, and distributional characteristics, make them a strong model for studying the important scientific problem of genome size variation. However, data on the genome size of Ensifera are rather sparse. In our study, we used flow cytometry to determine the genome size of 32 species of Ensifera, the smallest one being only 1C = 0.952 pg with the largest species up to 1C = 19.135 pg, representing a 20-fold range. This provides a broader blueprint for the genome size variation of Orthoptera than was previously available. We also completed the assembly of nine mitochondrial genomes and combined mitochondrial genome data from public databases to construct phylogenetic trees containing 32 species of Ensifera and three outgroups. Based on these inferred phylogenetic trees, we detected the phylogenetic signal of genome size variation in Ensifera and found that it was strong in both males and females. Phylogenetic comparative analyses revealed that there were no correlations between genome size and body size or flight ability in Tettigoniidae. Reconstruction of ancestral genome size revealed that the genome size of Ensifera evolved in a complex pattern, in which the genome size of the grylloid clade tended to decrease while that of the non-grylloid clade expanded significantly albeit with fluctuations. However, the evolutionary mechanisms underlying variation of genome size in Ensifera are still unknown.
format Online
Article
Text
id pubmed-8261143
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-82611432021-07-08 The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera) Yuan, Hao Huang, Yuan Mao, Ying Zhang, Nan Nie, Yimeng Zhang, Xue Zhou, Yafu Mao, Shaoli Front Genet Genetics Genomic size variation has long been a focus for biologists. However, due to the lack of genome size data, the mechanisms behind this variation and the biological significance of insect genome size are rarely studied systematically. The detailed taxonomy and phylogeny of the Ensifera, as well as the extensive documentation concerning their morphological, ecological, behavioral, and distributional characteristics, make them a strong model for studying the important scientific problem of genome size variation. However, data on the genome size of Ensifera are rather sparse. In our study, we used flow cytometry to determine the genome size of 32 species of Ensifera, the smallest one being only 1C = 0.952 pg with the largest species up to 1C = 19.135 pg, representing a 20-fold range. This provides a broader blueprint for the genome size variation of Orthoptera than was previously available. We also completed the assembly of nine mitochondrial genomes and combined mitochondrial genome data from public databases to construct phylogenetic trees containing 32 species of Ensifera and three outgroups. Based on these inferred phylogenetic trees, we detected the phylogenetic signal of genome size variation in Ensifera and found that it was strong in both males and females. Phylogenetic comparative analyses revealed that there were no correlations between genome size and body size or flight ability in Tettigoniidae. Reconstruction of ancestral genome size revealed that the genome size of Ensifera evolved in a complex pattern, in which the genome size of the grylloid clade tended to decrease while that of the non-grylloid clade expanded significantly albeit with fluctuations. However, the evolutionary mechanisms underlying variation of genome size in Ensifera are still unknown. Frontiers Media S.A. 2021-06-23 /pmc/articles/PMC8261143/ /pubmed/34249107 http://dx.doi.org/10.3389/fgene.2021.693541 Text en Copyright © 2021 Yuan, Huang, Mao, Zhang, Nie, Zhang, Zhou and Mao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Yuan, Hao
Huang, Yuan
Mao, Ying
Zhang, Nan
Nie, Yimeng
Zhang, Xue
Zhou, Yafu
Mao, Shaoli
The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
title The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
title_full The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
title_fullStr The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
title_full_unstemmed The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
title_short The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
title_sort evolutionary patterns of genome size in ensifera (insecta: orthoptera)
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8261143/
https://www.ncbi.nlm.nih.gov/pubmed/34249107
http://dx.doi.org/10.3389/fgene.2021.693541
work_keys_str_mv AT yuanhao theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT huangyuan theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT maoying theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT zhangnan theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT nieyimeng theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT zhangxue theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT zhouyafu theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT maoshaoli theevolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT yuanhao evolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT huangyuan evolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT maoying evolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT zhangnan evolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT nieyimeng evolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT zhangxue evolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT zhouyafu evolutionarypatternsofgenomesizeinensiferainsectaorthoptera
AT maoshaoli evolutionarypatternsofgenomesizeinensiferainsectaorthoptera