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Estimage: a webserver hub for the computation of methylation age

Methylage is an epigenetic marker of biological age that exploits the correlation between the methylation state of specific CG dinucleotides (CpGs) and chronological age (in years), gestational age (in weeks), cellular age (in cell cycles or as telomere length, in kilobases). Using DNA methylation d...

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Detalles Bibliográficos
Autores principales: Di Lena, Pietro, Sala, Claudia, Nardini, Christine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8262735/
https://www.ncbi.nlm.nih.gov/pubmed/34038548
http://dx.doi.org/10.1093/nar/gkab426
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author Di Lena, Pietro
Sala, Claudia
Nardini, Christine
author_facet Di Lena, Pietro
Sala, Claudia
Nardini, Christine
author_sort Di Lena, Pietro
collection PubMed
description Methylage is an epigenetic marker of biological age that exploits the correlation between the methylation state of specific CG dinucleotides (CpGs) and chronological age (in years), gestational age (in weeks), cellular age (in cell cycles or as telomere length, in kilobases). Using DNA methylation data, methylage is measurable via the so called epigenetic clocks. Importantly, alterations of the correlation between methylage and age (age acceleration or deceleration) have been stably associated with pathological states and occur long before clinical signs of diseases become overt, making epigenetic clocks a potentially disruptive tool in preventive, diagnostic and also in forensic applications. Nevertheless, methylage dependency from CpGs selection, mathematical modelling, tissue specificity and age range, still makes the potential of this biomarker limited. In order to enhance model comparisons, interchange, availability, robustness and standardization, we organized a selected set of clocks within a hub webservice, EstimAge (Estimate of methylation Age, http://estimage.iac.rm.cnr.it), which intuitively and informatively enables quick identification, computation and comparison of available clocks, with the support of standard statistics.
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spelling pubmed-82627352021-07-08 Estimage: a webserver hub for the computation of methylation age Di Lena, Pietro Sala, Claudia Nardini, Christine Nucleic Acids Res Web Server Issue Methylage is an epigenetic marker of biological age that exploits the correlation between the methylation state of specific CG dinucleotides (CpGs) and chronological age (in years), gestational age (in weeks), cellular age (in cell cycles or as telomere length, in kilobases). Using DNA methylation data, methylage is measurable via the so called epigenetic clocks. Importantly, alterations of the correlation between methylage and age (age acceleration or deceleration) have been stably associated with pathological states and occur long before clinical signs of diseases become overt, making epigenetic clocks a potentially disruptive tool in preventive, diagnostic and also in forensic applications. Nevertheless, methylage dependency from CpGs selection, mathematical modelling, tissue specificity and age range, still makes the potential of this biomarker limited. In order to enhance model comparisons, interchange, availability, robustness and standardization, we organized a selected set of clocks within a hub webservice, EstimAge (Estimate of methylation Age, http://estimage.iac.rm.cnr.it), which intuitively and informatively enables quick identification, computation and comparison of available clocks, with the support of standard statistics. Oxford University Press 2021-05-26 /pmc/articles/PMC8262735/ /pubmed/34038548 http://dx.doi.org/10.1093/nar/gkab426 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Web Server Issue
Di Lena, Pietro
Sala, Claudia
Nardini, Christine
Estimage: a webserver hub for the computation of methylation age
title Estimage: a webserver hub for the computation of methylation age
title_full Estimage: a webserver hub for the computation of methylation age
title_fullStr Estimage: a webserver hub for the computation of methylation age
title_full_unstemmed Estimage: a webserver hub for the computation of methylation age
title_short Estimage: a webserver hub for the computation of methylation age
title_sort estimage: a webserver hub for the computation of methylation age
topic Web Server Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8262735/
https://www.ncbi.nlm.nih.gov/pubmed/34038548
http://dx.doi.org/10.1093/nar/gkab426
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