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Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network

Low back pain which resulted from intervertebral disc degeneration (IDD) is a common health problem that afflicts people all over the world. Due to the lack of an overall understanding of the molecular interactions involved in IDD, we hope to better understand the pathogenetic mechanisms that drive...

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Autores principales: Huang, Junshen, Li, Yuxi, Ye, Ziwei, Cheng, Ziying, Huang, Jiajun, Lu, Shixin, Su, Kaihui, Liang, Yuwei, Li, Ming, Huang, Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8263249/
https://www.ncbi.nlm.nih.gov/pubmed/34307661
http://dx.doi.org/10.1155/2021/6618834
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author Huang, Junshen
Li, Yuxi
Ye, Ziwei
Cheng, Ziying
Huang, Jiajun
Lu, Shixin
Su, Kaihui
Liang, Yuwei
Li, Ming
Huang, Lin
author_facet Huang, Junshen
Li, Yuxi
Ye, Ziwei
Cheng, Ziying
Huang, Jiajun
Lu, Shixin
Su, Kaihui
Liang, Yuwei
Li, Ming
Huang, Lin
author_sort Huang, Junshen
collection PubMed
description Low back pain which resulted from intervertebral disc degeneration (IDD) is a common health problem that afflicts people all over the world. Due to the lack of an overall understanding of the molecular interactions involved in IDD, we hope to better understand the pathogenetic mechanisms that drive the degenerative process. The purpose of this study is to obtain mRNAs, miRNAs, lncRNAs, and circRNAs associated with IDD gained from public databases and to establish an interaction network. According to the results of microarray analysis and bioinformatics analysis from the contrast of IDD and normal nucleus pulposus tissues, a total of 49 mRNAs, 10 miRNAs, 30 lncRNAs, and 4 circRNAs were obtained and a lncRNA/circRNA–miRNA–mRNA interaction network was constructed. NEAT1–miR-5100–COL10A1 and miR663AHG/HEIH/hsa-circ-0003600–miR-4741–HAS2/HYAL1/LYVE1 might be potential interaction axes of the molecular mechanism in IDD. The increased expression of NEAT1 might inhibit miR-5100 and subsequently upregulate the expression of COL10A1, which leads to IDD, while the increased expression of miR663AHG/HEIH/hsa-circ-0003600 might inhibit miR-4741 and indirectly upregulate HAS2/HYAL1/LYVE1, and leads to the protection from IDD. More interaction axes are to be exploited to provide theoretical bases for further study on IDD.
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spelling pubmed-82632492021-07-22 Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network Huang, Junshen Li, Yuxi Ye, Ziwei Cheng, Ziying Huang, Jiajun Lu, Shixin Su, Kaihui Liang, Yuwei Li, Ming Huang, Lin Biomed Res Int Research Article Low back pain which resulted from intervertebral disc degeneration (IDD) is a common health problem that afflicts people all over the world. Due to the lack of an overall understanding of the molecular interactions involved in IDD, we hope to better understand the pathogenetic mechanisms that drive the degenerative process. The purpose of this study is to obtain mRNAs, miRNAs, lncRNAs, and circRNAs associated with IDD gained from public databases and to establish an interaction network. According to the results of microarray analysis and bioinformatics analysis from the contrast of IDD and normal nucleus pulposus tissues, a total of 49 mRNAs, 10 miRNAs, 30 lncRNAs, and 4 circRNAs were obtained and a lncRNA/circRNA–miRNA–mRNA interaction network was constructed. NEAT1–miR-5100–COL10A1 and miR663AHG/HEIH/hsa-circ-0003600–miR-4741–HAS2/HYAL1/LYVE1 might be potential interaction axes of the molecular mechanism in IDD. The increased expression of NEAT1 might inhibit miR-5100 and subsequently upregulate the expression of COL10A1, which leads to IDD, while the increased expression of miR663AHG/HEIH/hsa-circ-0003600 might inhibit miR-4741 and indirectly upregulate HAS2/HYAL1/LYVE1, and leads to the protection from IDD. More interaction axes are to be exploited to provide theoretical bases for further study on IDD. Hindawi 2021-06-30 /pmc/articles/PMC8263249/ /pubmed/34307661 http://dx.doi.org/10.1155/2021/6618834 Text en Copyright © 2021 Junshen Huang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Huang, Junshen
Li, Yuxi
Ye, Ziwei
Cheng, Ziying
Huang, Jiajun
Lu, Shixin
Su, Kaihui
Liang, Yuwei
Li, Ming
Huang, Lin
Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network
title Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network
title_full Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network
title_fullStr Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network
title_full_unstemmed Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network
title_short Prediction of a Potential Mechanism of Intervertebral Disc Degeneration Based on a Novel Competitive Endogenous RNA Network
title_sort prediction of a potential mechanism of intervertebral disc degeneration based on a novel competitive endogenous rna network
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8263249/
https://www.ncbi.nlm.nih.gov/pubmed/34307661
http://dx.doi.org/10.1155/2021/6618834
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