Cargando…

The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding

The folding of β-barrel outer membrane proteins (OMPs) in Gram-negative bacteria is catalysed by the β-barrel assembly machinery (BAM). How lateral opening in the β-barrel of the major subunit BamA assists in OMP folding, and the contribution of membrane disruption to BAM catalysis remain unresolved...

Descripción completa

Detalles Bibliográficos
Autores principales: White, Paul, Haysom, Samuel F., Iadanza, Matthew G., Higgins, Anna J., Machin, Jonathan M., Whitehouse, James M., Horne, Jim E., Schiffrin, Bob, Carpenter-Platt, Charlotte, Calabrese, Antonio N., Storek, Kelly M., Rutherford, Steven T., Brockwell, David J., Ranson, Neil A., Radford, Sheena E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8263589/
https://www.ncbi.nlm.nih.gov/pubmed/34234105
http://dx.doi.org/10.1038/s41467-021-24432-x
_version_ 1783719416651841536
author White, Paul
Haysom, Samuel F.
Iadanza, Matthew G.
Higgins, Anna J.
Machin, Jonathan M.
Whitehouse, James M.
Horne, Jim E.
Schiffrin, Bob
Carpenter-Platt, Charlotte
Calabrese, Antonio N.
Storek, Kelly M.
Rutherford, Steven T.
Brockwell, David J.
Ranson, Neil A.
Radford, Sheena E.
author_facet White, Paul
Haysom, Samuel F.
Iadanza, Matthew G.
Higgins, Anna J.
Machin, Jonathan M.
Whitehouse, James M.
Horne, Jim E.
Schiffrin, Bob
Carpenter-Platt, Charlotte
Calabrese, Antonio N.
Storek, Kelly M.
Rutherford, Steven T.
Brockwell, David J.
Ranson, Neil A.
Radford, Sheena E.
author_sort White, Paul
collection PubMed
description The folding of β-barrel outer membrane proteins (OMPs) in Gram-negative bacteria is catalysed by the β-barrel assembly machinery (BAM). How lateral opening in the β-barrel of the major subunit BamA assists in OMP folding, and the contribution of membrane disruption to BAM catalysis remain unresolved. Here, we use an anti-BamA monoclonal antibody fragment (Fab1) and two disulphide-crosslinked BAM variants (lid-locked (LL), and POTRA-5-locked (P5L)) to dissect these roles. Despite being lethal in vivo, we show that all complexes catalyse folding in vitro, albeit less efficiently than wild-type BAM. CryoEM reveals that while Fab1 and BAM-P5L trap an open-barrel state, BAM-LL contains a mixture of closed and contorted, partially-open structures. Finally, all three complexes globally destabilise the lipid bilayer, while BamA does not, revealing that the BAM lipoproteins are required for this function. Together the results provide insights into the role of BAM structure and lipid dynamics in OMP folding.
format Online
Article
Text
id pubmed-8263589
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-82635892021-07-23 The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding White, Paul Haysom, Samuel F. Iadanza, Matthew G. Higgins, Anna J. Machin, Jonathan M. Whitehouse, James M. Horne, Jim E. Schiffrin, Bob Carpenter-Platt, Charlotte Calabrese, Antonio N. Storek, Kelly M. Rutherford, Steven T. Brockwell, David J. Ranson, Neil A. Radford, Sheena E. Nat Commun Article The folding of β-barrel outer membrane proteins (OMPs) in Gram-negative bacteria is catalysed by the β-barrel assembly machinery (BAM). How lateral opening in the β-barrel of the major subunit BamA assists in OMP folding, and the contribution of membrane disruption to BAM catalysis remain unresolved. Here, we use an anti-BamA monoclonal antibody fragment (Fab1) and two disulphide-crosslinked BAM variants (lid-locked (LL), and POTRA-5-locked (P5L)) to dissect these roles. Despite being lethal in vivo, we show that all complexes catalyse folding in vitro, albeit less efficiently than wild-type BAM. CryoEM reveals that while Fab1 and BAM-P5L trap an open-barrel state, BAM-LL contains a mixture of closed and contorted, partially-open structures. Finally, all three complexes globally destabilise the lipid bilayer, while BamA does not, revealing that the BAM lipoproteins are required for this function. Together the results provide insights into the role of BAM structure and lipid dynamics in OMP folding. Nature Publishing Group UK 2021-07-07 /pmc/articles/PMC8263589/ /pubmed/34234105 http://dx.doi.org/10.1038/s41467-021-24432-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
White, Paul
Haysom, Samuel F.
Iadanza, Matthew G.
Higgins, Anna J.
Machin, Jonathan M.
Whitehouse, James M.
Horne, Jim E.
Schiffrin, Bob
Carpenter-Platt, Charlotte
Calabrese, Antonio N.
Storek, Kelly M.
Rutherford, Steven T.
Brockwell, David J.
Ranson, Neil A.
Radford, Sheena E.
The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding
title The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding
title_full The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding
title_fullStr The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding
title_full_unstemmed The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding
title_short The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding
title_sort role of membrane destabilisation and protein dynamics in bam catalysed omp folding
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8263589/
https://www.ncbi.nlm.nih.gov/pubmed/34234105
http://dx.doi.org/10.1038/s41467-021-24432-x
work_keys_str_mv AT whitepaul theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT haysomsamuelf theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT iadanzamatthewg theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT higginsannaj theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT machinjonathanm theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT whitehousejamesm theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT hornejime theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT schiffrinbob theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT carpenterplattcharlotte theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT calabreseantonion theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT storekkellym theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT rutherfordstevent theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT brockwelldavidj theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT ransonneila theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT radfordsheenae theroleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT whitepaul roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT haysomsamuelf roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT iadanzamatthewg roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT higginsannaj roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT machinjonathanm roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT whitehousejamesm roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT hornejime roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT schiffrinbob roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT carpenterplattcharlotte roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT calabreseantonion roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT storekkellym roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT rutherfordstevent roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT brockwelldavidj roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT ransonneila roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding
AT radfordsheenae roleofmembranedestabilisationandproteindynamicsinbamcatalysedompfolding