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Searching for scientific evidence in a pandemic: An overview of TREC-COVID

We present an overview of the TREC-COVID Challenge, an information retrieval (IR) shared task to evaluate search on scientific literature related to COVID-19. The goals of TREC-COVID include the construction of a pandemic search test collection and the evaluation of IR methods for COVID-19. The chal...

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Autores principales: Roberts, Kirk, Alam, Tasmeer, Bedrick, Steven, Demner-Fushman, Dina, Lo, Kyle, Soboroff, Ian, Voorhees, Ellen, Wang, Lucy Lu, Hersh, William R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Published by Elsevier Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8264272/
https://www.ncbi.nlm.nih.gov/pubmed/34245913
http://dx.doi.org/10.1016/j.jbi.2021.103865
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author Roberts, Kirk
Alam, Tasmeer
Bedrick, Steven
Demner-Fushman, Dina
Lo, Kyle
Soboroff, Ian
Voorhees, Ellen
Wang, Lucy Lu
Hersh, William R.
author_facet Roberts, Kirk
Alam, Tasmeer
Bedrick, Steven
Demner-Fushman, Dina
Lo, Kyle
Soboroff, Ian
Voorhees, Ellen
Wang, Lucy Lu
Hersh, William R.
author_sort Roberts, Kirk
collection PubMed
description We present an overview of the TREC-COVID Challenge, an information retrieval (IR) shared task to evaluate search on scientific literature related to COVID-19. The goals of TREC-COVID include the construction of a pandemic search test collection and the evaluation of IR methods for COVID-19. The challenge was conducted over five rounds from April to July 2020, with participation from 92 unique teams and 556 individual submissions. A total of 50 topics (sets of related queries) were used in the evaluation, starting at 30 topics for Round 1 and adding 5 new topics per round to target emerging topics at that state of the still-emerging pandemic. This paper provides a comprehensive overview of the structure and results of TREC-COVID. Specifically, the paper provides details on the background, task structure, topic structure, corpus, participation, pooling, assessment, judgments, results, top-performing systems, lessons learned, and benchmark datasets.
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spelling pubmed-82642722021-07-08 Searching for scientific evidence in a pandemic: An overview of TREC-COVID Roberts, Kirk Alam, Tasmeer Bedrick, Steven Demner-Fushman, Dina Lo, Kyle Soboroff, Ian Voorhees, Ellen Wang, Lucy Lu Hersh, William R. J Biomed Inform Original Research We present an overview of the TREC-COVID Challenge, an information retrieval (IR) shared task to evaluate search on scientific literature related to COVID-19. The goals of TREC-COVID include the construction of a pandemic search test collection and the evaluation of IR methods for COVID-19. The challenge was conducted over five rounds from April to July 2020, with participation from 92 unique teams and 556 individual submissions. A total of 50 topics (sets of related queries) were used in the evaluation, starting at 30 topics for Round 1 and adding 5 new topics per round to target emerging topics at that state of the still-emerging pandemic. This paper provides a comprehensive overview of the structure and results of TREC-COVID. Specifically, the paper provides details on the background, task structure, topic structure, corpus, participation, pooling, assessment, judgments, results, top-performing systems, lessons learned, and benchmark datasets. Published by Elsevier Inc. 2021-09 2021-07-08 /pmc/articles/PMC8264272/ /pubmed/34245913 http://dx.doi.org/10.1016/j.jbi.2021.103865 Text en © 2021 Published by Elsevier Inc. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Original Research
Roberts, Kirk
Alam, Tasmeer
Bedrick, Steven
Demner-Fushman, Dina
Lo, Kyle
Soboroff, Ian
Voorhees, Ellen
Wang, Lucy Lu
Hersh, William R.
Searching for scientific evidence in a pandemic: An overview of TREC-COVID
title Searching for scientific evidence in a pandemic: An overview of TREC-COVID
title_full Searching for scientific evidence in a pandemic: An overview of TREC-COVID
title_fullStr Searching for scientific evidence in a pandemic: An overview of TREC-COVID
title_full_unstemmed Searching for scientific evidence in a pandemic: An overview of TREC-COVID
title_short Searching for scientific evidence in a pandemic: An overview of TREC-COVID
title_sort searching for scientific evidence in a pandemic: an overview of trec-covid
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8264272/
https://www.ncbi.nlm.nih.gov/pubmed/34245913
http://dx.doi.org/10.1016/j.jbi.2021.103865
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