Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing

Benthic microbial diversity in Tongyeong, South Korea, was analyzed using next-generation sequencing of the 16S rRNA genes, to reveal the effects of seasonal variations on the microbial community in sediment. Proteobacteria was the dominant phylum, with a relative abundance of 61.5 to 68.1%.

Detalles Bibliográficos
Autores principales: Oktavitri, Nur Indradewi, Kim, Jong-Oh, Kim, Kyunghoi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Amplicon Sequence Collections
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8265228/
https://www.ncbi.nlm.nih.gov/pubmed/34236231
http://dx.doi.org/10.1128/MRA.00446-21
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author Oktavitri, Nur Indradewi
Kim, Jong-Oh
Kim, Kyunghoi
author_facet Oktavitri, Nur Indradewi
Kim, Jong-Oh
Kim, Kyunghoi
author_sort Oktavitri, Nur Indradewi
collection PubMed
description Benthic microbial diversity in Tongyeong, South Korea, was analyzed using next-generation sequencing of the 16S rRNA genes, to reveal the effects of seasonal variations on the microbial community in sediment. Proteobacteria was the dominant phylum, with a relative abundance of 61.5 to 68.1%.
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spelling pubmed-82652282021-07-09 Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing Oktavitri, Nur Indradewi Kim, Jong-Oh Kim, Kyunghoi Microbiol Resour Announc Amplicon Sequence Collections Benthic microbial diversity in Tongyeong, South Korea, was analyzed using next-generation sequencing of the 16S rRNA genes, to reveal the effects of seasonal variations on the microbial community in sediment. Proteobacteria was the dominant phylum, with a relative abundance of 61.5 to 68.1%. American Society for Microbiology 2021-07-08 /pmc/articles/PMC8265228/ /pubmed/34236231 http://dx.doi.org/10.1128/MRA.00446-21 Text en Copyright © 2021 Oktavitri et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Amplicon Sequence Collections
Oktavitri, Nur Indradewi
Kim, Jong-Oh
Kim, Kyunghoi
Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing
title Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing
title_full Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing
title_fullStr Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing
title_full_unstemmed Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing
title_short Seasonal Variation of Microbial Diversity of Coastal Sediment in Tongyeong, South Korea, Using 16S rRNA Gene Amplicon Sequencing
title_sort seasonal variation of microbial diversity of coastal sediment in tongyeong, south korea, using 16s rrna gene amplicon sequencing
topic Amplicon Sequence Collections
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8265228/
https://www.ncbi.nlm.nih.gov/pubmed/34236231
http://dx.doi.org/10.1128/MRA.00446-21
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