The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne

The complete chloroplast genome of Geranium sibiricum Linne. was sequenced, assembled and annotated. It is a circular form of 150,656 bp in length, which was separated into four distinct regions, a large single copy (LSC) of 73,862 bp, a small single copy region (SSC) of 52,666 bp, two inverted repe...

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Autores principales: Huizhen, Sun, Xue, Xinyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266239/
https://www.ncbi.nlm.nih.gov/pubmed/34286090
http://dx.doi.org/10.1080/23802359.2021.1947912
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author Huizhen, Sun
Xue, Xinyuan
author_facet Huizhen, Sun
Xue, Xinyuan
author_sort Huizhen, Sun
collection PubMed
description The complete chloroplast genome of Geranium sibiricum Linne. was sequenced, assembled and annotated. It is a circular form of 150,656 bp in length, which was separated into four distinct regions, a large single copy (LSC) of 73,862 bp, a small single copy region (SSC) of 52,666 bp, two inverted repeats (IR) of 12,064bp. A total of 124 genes were predicted, of which, 87 encode proteins, 4 rRNA, 33 tRNA. The evolutionary history was inferred using Maximum Likelihood method, and the result indicates that G. sibiricum was grouped within Geraniaceae, and comprised a clade with Geranium palmatum under 100% Bootstrap value.
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spelling pubmed-82662392021-07-19 The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne Huizhen, Sun Xue, Xinyuan Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Geranium sibiricum Linne. was sequenced, assembled and annotated. It is a circular form of 150,656 bp in length, which was separated into four distinct regions, a large single copy (LSC) of 73,862 bp, a small single copy region (SSC) of 52,666 bp, two inverted repeats (IR) of 12,064bp. A total of 124 genes were predicted, of which, 87 encode proteins, 4 rRNA, 33 tRNA. The evolutionary history was inferred using Maximum Likelihood method, and the result indicates that G. sibiricum was grouped within Geraniaceae, and comprised a clade with Geranium palmatum under 100% Bootstrap value. Taylor & Francis 2021-07-06 /pmc/articles/PMC8266239/ /pubmed/34286090 http://dx.doi.org/10.1080/23802359.2021.1947912 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Huizhen, Sun
Xue, Xinyuan
The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne
title The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne
title_full The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne
title_fullStr The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne
title_full_unstemmed The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne
title_short The sequencing and characterization of chloroplast genome of Geranium sibiricum Linne
title_sort sequencing and characterization of chloroplast genome of geranium sibiricum linne
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266239/
https://www.ncbi.nlm.nih.gov/pubmed/34286090
http://dx.doi.org/10.1080/23802359.2021.1947912
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