The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses

The complete mitochondrial genome can provide novel insights into understanding the mechanism underlying mitogenome evolution. In the present study, the whole mitochondrial genome of Rhynchocypris oxycephalus was determined to 16608 bp (GenBank accession No: MW057563), including 13 protein-coding ge...

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Autores principales: Zhang, Cheng, Zhang, Shun, Tian, Zhe, Cheng, Shun, Wang, Danli, Xu, Shanliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266249/
https://www.ncbi.nlm.nih.gov/pubmed/34286081
http://dx.doi.org/10.1080/23802359.2021.1875921
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author Zhang, Cheng
Zhang, Shun
Tian, Zhe
Cheng, Shun
Wang, Danli
Xu, Shanliang
author_facet Zhang, Cheng
Zhang, Shun
Tian, Zhe
Cheng, Shun
Wang, Danli
Xu, Shanliang
author_sort Zhang, Cheng
collection PubMed
description The complete mitochondrial genome can provide novel insights into understanding the mechanism underlying mitogenome evolution. In the present study, the whole mitochondrial genome of Rhynchocypris oxycephalus was determined to 16608 bp (GenBank accession No: MW057563), including 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and one control region. The overall base composition was 28.62% A, 27.23% T, 26.31% C and 17.84% G, with a total A + T content of 55.85%. The Maximum Likelihood tree showed that the phylogenetic relationship is closer between R. oxycephalus and Phoxinus oxycephalus jouyi than the other species. The whole mitogenome of this species will be useful for the future animal evolutionary, phylogenetic relationship, and genomic studies in the genus Phoxinus.
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spelling pubmed-82662492021-07-19 The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses Zhang, Cheng Zhang, Shun Tian, Zhe Cheng, Shun Wang, Danli Xu, Shanliang Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome can provide novel insights into understanding the mechanism underlying mitogenome evolution. In the present study, the whole mitochondrial genome of Rhynchocypris oxycephalus was determined to 16608 bp (GenBank accession No: MW057563), including 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and one control region. The overall base composition was 28.62% A, 27.23% T, 26.31% C and 17.84% G, with a total A + T content of 55.85%. The Maximum Likelihood tree showed that the phylogenetic relationship is closer between R. oxycephalus and Phoxinus oxycephalus jouyi than the other species. The whole mitogenome of this species will be useful for the future animal evolutionary, phylogenetic relationship, and genomic studies in the genus Phoxinus. Taylor & Francis 2021-07-05 /pmc/articles/PMC8266249/ /pubmed/34286081 http://dx.doi.org/10.1080/23802359.2021.1875921 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Cheng
Zhang, Shun
Tian, Zhe
Cheng, Shun
Wang, Danli
Xu, Shanliang
The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses
title The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses
title_full The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses
title_fullStr The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses
title_full_unstemmed The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses
title_short The complete mitochondrial genome of Chinese minnow (Rhynchocypris oxycephalus) and its phylogenetic analyses
title_sort complete mitochondrial genome of chinese minnow (rhynchocypris oxycephalus) and its phylogenetic analyses
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266249/
https://www.ncbi.nlm.nih.gov/pubmed/34286081
http://dx.doi.org/10.1080/23802359.2021.1875921
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