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A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma
Background: Lung adenocarcinoma (LUAD) is a heterogeneous disease characterized by high mortality and poor prognosis. Ferroptosis, a newly discovered iron-dependent type of cell death, has been found to play a crucial role in the development of cancers. However, little is known about the prognostic...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266333/ https://www.ncbi.nlm.nih.gov/pubmed/34115610 http://dx.doi.org/10.18632/aging.203140 |
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author | Jin, Jingjing Liu, Chuan Yu, Shanshan Cai, Lingyi Sitrakiniaina, Andriamifahimanjaka Gu, Ruihong Li, Wenfeng Wu, Fangfang Xue, Xiangyang |
author_facet | Jin, Jingjing Liu, Chuan Yu, Shanshan Cai, Lingyi Sitrakiniaina, Andriamifahimanjaka Gu, Ruihong Li, Wenfeng Wu, Fangfang Xue, Xiangyang |
author_sort | Jin, Jingjing |
collection | PubMed |
description | Background: Lung adenocarcinoma (LUAD) is a heterogeneous disease characterized by high mortality and poor prognosis. Ferroptosis, a newly discovered iron-dependent type of cell death, has been found to play a crucial role in the development of cancers. However, little is known about the prognostic value of ferroptosis-related genes (FRGs) in LUAD. Methods: In the present study, RNA-seq transcriptome data of LUAD patients were obtained from The Cancer Genome Atlas (TCGA) database. Cox regression analysis was used to construct a multigene signature. Kaplan–Meier survival and receiver operating characteristic (ROC) curves were utilized to assess the prognostic prediction efficiency of the constructed survival model. LUAD patients from the GSE30219 dataset were used for validation. Results: We found 46 differentially expressed FRGs between LUAD and adjacent normal tissues. Via univariate and multivariate Cox regression analyses, 5 differentially expressed FRGs were identified as being highly correlated with LUAD. Patients were divided into low- and high-risk groups according to the risk score. We found that the overall survival (OS) of patients in the high-risk group was significantly worse than that of their low-risk counterparts. (P < 0.0001 in the TCGA dataset and P = 0.044 in the GSE30219 cohort). In addition, gene set variation analysis (GSVA) of the tumor microenvironment of the two groups may explain the different survival of LUAD patients. Conclusions: Our study identified a novel FRG signature that could be used to evaluate and predict the prognosis of LUAD patients, which might provide a new therapeutic target for the treatment of LUAD patients. |
format | Online Article Text |
id | pubmed-8266333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-82663332021-07-09 A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma Jin, Jingjing Liu, Chuan Yu, Shanshan Cai, Lingyi Sitrakiniaina, Andriamifahimanjaka Gu, Ruihong Li, Wenfeng Wu, Fangfang Xue, Xiangyang Aging (Albany NY) Research Paper Background: Lung adenocarcinoma (LUAD) is a heterogeneous disease characterized by high mortality and poor prognosis. Ferroptosis, a newly discovered iron-dependent type of cell death, has been found to play a crucial role in the development of cancers. However, little is known about the prognostic value of ferroptosis-related genes (FRGs) in LUAD. Methods: In the present study, RNA-seq transcriptome data of LUAD patients were obtained from The Cancer Genome Atlas (TCGA) database. Cox regression analysis was used to construct a multigene signature. Kaplan–Meier survival and receiver operating characteristic (ROC) curves were utilized to assess the prognostic prediction efficiency of the constructed survival model. LUAD patients from the GSE30219 dataset were used for validation. Results: We found 46 differentially expressed FRGs between LUAD and adjacent normal tissues. Via univariate and multivariate Cox regression analyses, 5 differentially expressed FRGs were identified as being highly correlated with LUAD. Patients were divided into low- and high-risk groups according to the risk score. We found that the overall survival (OS) of patients in the high-risk group was significantly worse than that of their low-risk counterparts. (P < 0.0001 in the TCGA dataset and P = 0.044 in the GSE30219 cohort). In addition, gene set variation analysis (GSVA) of the tumor microenvironment of the two groups may explain the different survival of LUAD patients. Conclusions: Our study identified a novel FRG signature that could be used to evaluate and predict the prognosis of LUAD patients, which might provide a new therapeutic target for the treatment of LUAD patients. Impact Journals 2021-06-11 /pmc/articles/PMC8266333/ /pubmed/34115610 http://dx.doi.org/10.18632/aging.203140 Text en Copyright: © 2021 Jin et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Jin, Jingjing Liu, Chuan Yu, Shanshan Cai, Lingyi Sitrakiniaina, Andriamifahimanjaka Gu, Ruihong Li, Wenfeng Wu, Fangfang Xue, Xiangyang A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
title | A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
title_full | A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
title_fullStr | A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
title_full_unstemmed | A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
title_short | A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
title_sort | novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266333/ https://www.ncbi.nlm.nih.gov/pubmed/34115610 http://dx.doi.org/10.18632/aging.203140 |
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