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Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer
Ferroptosis, a form of programmed cell death induced by excess iron-dependent lipid peroxidation product accumulation, plays a critical role in cancer. However, there are few reports about ferroptosis in endometrial cancer (EC). This article explores the relationship between ferroptosis-related gene...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266342/ https://www.ncbi.nlm.nih.gov/pubmed/34170849 http://dx.doi.org/10.18632/aging.203190 |
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author | Weijiao, Yin Fuchun, Liao Mengjie, Chen Xiaoqing, Qin Hao, Lai Yuan, Lin Desheng, Yao |
author_facet | Weijiao, Yin Fuchun, Liao Mengjie, Chen Xiaoqing, Qin Hao, Lai Yuan, Lin Desheng, Yao |
author_sort | Weijiao, Yin |
collection | PubMed |
description | Ferroptosis, a form of programmed cell death induced by excess iron-dependent lipid peroxidation product accumulation, plays a critical role in cancer. However, there are few reports about ferroptosis in endometrial cancer (EC). This article explores the relationship between ferroptosis-related gene (FRG) expression and prognosis in EC patients. One hundred thirty-five FRGs were obtained by mining the literature, retrieving GeneCards and analyzing 552 malignant uterine corpus endometrial carcinoma (UCEC) samples, which were randomly assigned to training and testing groups (1:1 ratio), and 23 normal samples from The Cancer Genome Atlas (TCGA). We established a signature using eight screened FRGs (MDM2, GPX4, PRKAA2, PRNP, SLC11A2, ATP5MC3, PHKG2 and ACO1) related to overall survival using LASSO regression analysis. The samples were divided into low- and high-risk subgroups according to the median risk score. Kaplan-Meier survival curves showed that the low-risk group had better OS. ROC curves showed that this signature performed well in predicting OS (1-, 2-, 3-, and 5-year AUCs of 0.676, 0.775, 0.797, and 0.826, respectively). We systematically analyzed the immune infiltrating profile in UCEC samples from TCGA. Overall, our study identified a novel prognostic signature of 8 FRGs that can potentially predict the prognosis of EC. |
format | Online Article Text |
id | pubmed-8266342 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-82663422021-07-09 Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer Weijiao, Yin Fuchun, Liao Mengjie, Chen Xiaoqing, Qin Hao, Lai Yuan, Lin Desheng, Yao Aging (Albany NY) Research Paper Ferroptosis, a form of programmed cell death induced by excess iron-dependent lipid peroxidation product accumulation, plays a critical role in cancer. However, there are few reports about ferroptosis in endometrial cancer (EC). This article explores the relationship between ferroptosis-related gene (FRG) expression and prognosis in EC patients. One hundred thirty-five FRGs were obtained by mining the literature, retrieving GeneCards and analyzing 552 malignant uterine corpus endometrial carcinoma (UCEC) samples, which were randomly assigned to training and testing groups (1:1 ratio), and 23 normal samples from The Cancer Genome Atlas (TCGA). We established a signature using eight screened FRGs (MDM2, GPX4, PRKAA2, PRNP, SLC11A2, ATP5MC3, PHKG2 and ACO1) related to overall survival using LASSO regression analysis. The samples were divided into low- and high-risk subgroups according to the median risk score. Kaplan-Meier survival curves showed that the low-risk group had better OS. ROC curves showed that this signature performed well in predicting OS (1-, 2-, 3-, and 5-year AUCs of 0.676, 0.775, 0.797, and 0.826, respectively). We systematically analyzed the immune infiltrating profile in UCEC samples from TCGA. Overall, our study identified a novel prognostic signature of 8 FRGs that can potentially predict the prognosis of EC. Impact Journals 2021-06-24 /pmc/articles/PMC8266342/ /pubmed/34170849 http://dx.doi.org/10.18632/aging.203190 Text en Copyright: © 2021 Weijiao et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Weijiao, Yin Fuchun, Liao Mengjie, Chen Xiaoqing, Qin Hao, Lai Yuan, Lin Desheng, Yao Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer |
title | Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer |
title_full | Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer |
title_fullStr | Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer |
title_full_unstemmed | Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer |
title_short | Immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer |
title_sort | immune infiltration and a ferroptosis-associated gene signature for predicting the prognosis of patients with endometrial cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266342/ https://www.ncbi.nlm.nih.gov/pubmed/34170849 http://dx.doi.org/10.18632/aging.203190 |
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