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Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma
To identify novel prognostic and therapeutic targets for osteosarcoma patients, we compared the gene expression profiles of osteosarcoma and control tissues from the GSE42352 dataset in the Gene Expression Omnibus. Differentially expressed genes were subjected to Gene Ontology, Kyoto Encyclopedia of...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266349/ https://www.ncbi.nlm.nih.gov/pubmed/34156352 http://dx.doi.org/10.18632/aging.203165 |
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author | Wu, Bo Yang, Wenzhuo Fu, Zhaoyu Xie, Haoqun Guo, Zhen Liu, Daqun Ge, Junliang Zhong, Sheng Liu, Luwei Liu, Jingyi Zhu, Dong |
author_facet | Wu, Bo Yang, Wenzhuo Fu, Zhaoyu Xie, Haoqun Guo, Zhen Liu, Daqun Ge, Junliang Zhong, Sheng Liu, Luwei Liu, Jingyi Zhu, Dong |
author_sort | Wu, Bo |
collection | PubMed |
description | To identify novel prognostic and therapeutic targets for osteosarcoma patients, we compared the gene expression profiles of osteosarcoma and control tissues from the GSE42352 dataset in the Gene Expression Omnibus. Differentially expressed genes were subjected to Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, Gene Set Enrichment and protein-protein interaction network analyses. Survival curve analyses indicated that osteosarcoma patients with lower mRNA levels of cyclin-dependent kinase 1 (CDK1) and topoisomerase II alpha had better prognoses. Various computer-aided techniques were used to identify potential CDK1 inhibitors for osteosarcoma patients, and PHA-793887 was predicted to be a safe drug with a high binding affinity for CDK1. In vitro, MTT and colony formation assays demonstrated that PHA-793887 reduced the viability and clonogenicity of osteosarcoma cells, while a scratch assay suggested that PHA-793887 impaired the migration of these cells. Flow cytometry experiments revealed that PHA-793887 dose-dependently induced apoptosis in osteosarcoma cells. Western blotting and enzyme-linked immunosorbent assays indicated that CDK1 expression in osteosarcoma cells declined with increasing PHA-793887 concentrations. These results suggest that PHA-793887 could be a promising new treatment for osteosarcoma. |
format | Online Article Text |
id | pubmed-8266349 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-82663492021-07-09 Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma Wu, Bo Yang, Wenzhuo Fu, Zhaoyu Xie, Haoqun Guo, Zhen Liu, Daqun Ge, Junliang Zhong, Sheng Liu, Luwei Liu, Jingyi Zhu, Dong Aging (Albany NY) Research Paper To identify novel prognostic and therapeutic targets for osteosarcoma patients, we compared the gene expression profiles of osteosarcoma and control tissues from the GSE42352 dataset in the Gene Expression Omnibus. Differentially expressed genes were subjected to Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, Gene Set Enrichment and protein-protein interaction network analyses. Survival curve analyses indicated that osteosarcoma patients with lower mRNA levels of cyclin-dependent kinase 1 (CDK1) and topoisomerase II alpha had better prognoses. Various computer-aided techniques were used to identify potential CDK1 inhibitors for osteosarcoma patients, and PHA-793887 was predicted to be a safe drug with a high binding affinity for CDK1. In vitro, MTT and colony formation assays demonstrated that PHA-793887 reduced the viability and clonogenicity of osteosarcoma cells, while a scratch assay suggested that PHA-793887 impaired the migration of these cells. Flow cytometry experiments revealed that PHA-793887 dose-dependently induced apoptosis in osteosarcoma cells. Western blotting and enzyme-linked immunosorbent assays indicated that CDK1 expression in osteosarcoma cells declined with increasing PHA-793887 concentrations. These results suggest that PHA-793887 could be a promising new treatment for osteosarcoma. Impact Journals 2021-06-21 /pmc/articles/PMC8266349/ /pubmed/34156352 http://dx.doi.org/10.18632/aging.203165 Text en Copyright: © 2021 Wu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Wu, Bo Yang, Wenzhuo Fu, Zhaoyu Xie, Haoqun Guo, Zhen Liu, Daqun Ge, Junliang Zhong, Sheng Liu, Luwei Liu, Jingyi Zhu, Dong Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma |
title | Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma |
title_full | Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma |
title_fullStr | Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma |
title_full_unstemmed | Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma |
title_short | Selected using bioinformatics and molecular docking analyses, PHA-793887 is effective against osteosarcoma |
title_sort | selected using bioinformatics and molecular docking analyses, pha-793887 is effective against osteosarcoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266349/ https://www.ncbi.nlm.nih.gov/pubmed/34156352 http://dx.doi.org/10.18632/aging.203165 |
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