Cargando…

Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations

Venous thromboembolism (VTE) is a complex, multifactorial problem, the development of which depends on a combination of genetic and acqfiguired risk factors. In a Spanish population, the Thrombo inCode score (or TiC score), which combines clinical and genetic risk components, was recently proven bet...

Descripción completa

Detalles Bibliográficos
Autores principales: Salas, Eduardo, Farm, Maria, Pich, Sara, Onelöv, Liselotte, Guillen, Kevin, Ortega, Israel, Antovic, Jovan P., Soria, Jose Manuel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Georg Thieme Verlag KG 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266419/
https://www.ncbi.nlm.nih.gov/pubmed/34263111
http://dx.doi.org/10.1055/s-0041-1729626
_version_ 1783719943369392128
author Salas, Eduardo
Farm, Maria
Pich, Sara
Onelöv, Liselotte
Guillen, Kevin
Ortega, Israel
Antovic, Jovan P.
Soria, Jose Manuel
author_facet Salas, Eduardo
Farm, Maria
Pich, Sara
Onelöv, Liselotte
Guillen, Kevin
Ortega, Israel
Antovic, Jovan P.
Soria, Jose Manuel
author_sort Salas, Eduardo
collection PubMed
description Venous thromboembolism (VTE) is a complex, multifactorial problem, the development of which depends on a combination of genetic and acqfiguired risk factors. In a Spanish population, the Thrombo inCode score (or TiC score), which combines clinical and genetic risk components, was recently proven better at determining the risk of VTE than the commonly used model involving the analysis of two genetic variants associated with thrombophilia: the Factor V Leiden (F5 rs6025) and the G20210A prothrombin (F2 rs1799963). The aim of the present case–control study was to validate the VTE risk predictive capacity of the TiC score in a Northern European population (from Sweden). The study included 173 subjects with VTE and 196 controls. All were analyzed for the genetic risk variants included in the TiC gene panel. Standard measures —receiver operating characteristic (ROC) area under the curve (AUC), sensitivity, specificity, and odds ratio (OR)—were calculated. The TiC score returned an AUC value of 0.673, a sensitivity of 72.25%, a specificity of 60.62%, and an OR of 4.11. These AUC, sensitivity, and OR values are all greater than those associated with the currently used combination of genetic variants. A TiC version adjusted for the allelic frequencies of the Swedish population significantly improved its AUC value (0.783). In summary, the TiC score returned more reliable risk estimates for the studied Northern European population than did the analysis of the Factor V Leiden and the G20210A genetic variations in combination. Thus, the TiC score can be reliably used with European populations, despite differences in allelic frequencies.
format Online
Article
Text
id pubmed-8266419
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Georg Thieme Verlag KG
record_format MEDLINE/PubMed
spelling pubmed-82664192021-07-13 Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations Salas, Eduardo Farm, Maria Pich, Sara Onelöv, Liselotte Guillen, Kevin Ortega, Israel Antovic, Jovan P. Soria, Jose Manuel TH Open Venous thromboembolism (VTE) is a complex, multifactorial problem, the development of which depends on a combination of genetic and acqfiguired risk factors. In a Spanish population, the Thrombo inCode score (or TiC score), which combines clinical and genetic risk components, was recently proven better at determining the risk of VTE than the commonly used model involving the analysis of two genetic variants associated with thrombophilia: the Factor V Leiden (F5 rs6025) and the G20210A prothrombin (F2 rs1799963). The aim of the present case–control study was to validate the VTE risk predictive capacity of the TiC score in a Northern European population (from Sweden). The study included 173 subjects with VTE and 196 controls. All were analyzed for the genetic risk variants included in the TiC gene panel. Standard measures —receiver operating characteristic (ROC) area under the curve (AUC), sensitivity, specificity, and odds ratio (OR)—were calculated. The TiC score returned an AUC value of 0.673, a sensitivity of 72.25%, a specificity of 60.62%, and an OR of 4.11. These AUC, sensitivity, and OR values are all greater than those associated with the currently used combination of genetic variants. A TiC version adjusted for the allelic frequencies of the Swedish population significantly improved its AUC value (0.783). In summary, the TiC score returned more reliable risk estimates for the studied Northern European population than did the analysis of the Factor V Leiden and the G20210A genetic variations in combination. Thus, the TiC score can be reliably used with European populations, despite differences in allelic frequencies. Georg Thieme Verlag KG 2021-07-08 /pmc/articles/PMC8266419/ /pubmed/34263111 http://dx.doi.org/10.1055/s-0041-1729626 Text en The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution License, permitting unrestricted use, distribution, and reproduction so long as the original work is properly cited. ( https://creativecommons.org/licenses/by/4.0/ ) https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Salas, Eduardo
Farm, Maria
Pich, Sara
Onelöv, Liselotte
Guillen, Kevin
Ortega, Israel
Antovic, Jovan P.
Soria, Jose Manuel
Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations
title Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations
title_full Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations
title_fullStr Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations
title_full_unstemmed Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations
title_short Predictive Ability of a Clinical-Genetic Risk Score for Venous Thromboembolism in Northern and Southern European Populations
title_sort predictive ability of a clinical-genetic risk score for venous thromboembolism in northern and southern european populations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266419/
https://www.ncbi.nlm.nih.gov/pubmed/34263111
http://dx.doi.org/10.1055/s-0041-1729626
work_keys_str_mv AT salaseduardo predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations
AT farmmaria predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations
AT pichsara predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations
AT onelovliselotte predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations
AT guillenkevin predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations
AT ortegaisrael predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations
AT antovicjovanp predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations
AT soriajosemanuel predictiveabilityofaclinicalgeneticriskscoreforvenousthromboembolisminnorthernandsoutherneuropeanpopulations