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Aggregation-and-Attention Network for brain tumor segmentation

BACKGROUND: Glioma is a malignant brain tumor; its location is complex and is difficult to remove surgically. To diagnosis the brain tumor, doctors can precisely diagnose and localize the disease using medical images. However, the computer-assisted diagnosis for the brain tumor diagnosis is still th...

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Autores principales: Lin, Chih-Wei, Hong, Yu, Liu, Jinfu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8267236/
https://www.ncbi.nlm.nih.gov/pubmed/34243703
http://dx.doi.org/10.1186/s12880-021-00639-8
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author Lin, Chih-Wei
Hong, Yu
Liu, Jinfu
author_facet Lin, Chih-Wei
Hong, Yu
Liu, Jinfu
author_sort Lin, Chih-Wei
collection PubMed
description BACKGROUND: Glioma is a malignant brain tumor; its location is complex and is difficult to remove surgically. To diagnosis the brain tumor, doctors can precisely diagnose and localize the disease using medical images. However, the computer-assisted diagnosis for the brain tumor diagnosis is still the problem because the rough segmentation of the brain tumor makes the internal grade of the tumor incorrect. METHODS: In this paper, we proposed an Aggregation-and-Attention Network for brain tumor segmentation. The proposed network takes the U-Net as the backbone, aggregates multi-scale semantic information, and focuses on crucial information to perform brain tumor segmentation. To this end, we proposed an enhanced down-sampling module and Up-Sampling Layer to compensate for the information loss. The multi-scale connection module is to construct the multi-receptive semantic fusion between encoder and decoder. Furthermore, we designed a dual-attention fusion module that can extract and enhance the spatial relationship of magnetic resonance imaging and applied the strategy of deep supervision in different parts of the proposed network. RESULTS: Experimental results show that the performance of the proposed framework is the best on the BraTS2020 dataset, compared with the-state-of-art networks. The performance of the proposed framework surpasses all the comparison networks, and its average accuracies of the four indexes are 0.860, 0.885, 0.932, and 1.2325, respectively. CONCLUSIONS: The framework and modules of the proposed framework are scientific and practical, which can extract and aggregate useful semantic information and enhance the ability of glioma segmentation.
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spelling pubmed-82672362021-07-09 Aggregation-and-Attention Network for brain tumor segmentation Lin, Chih-Wei Hong, Yu Liu, Jinfu BMC Med Imaging Technical Advance BACKGROUND: Glioma is a malignant brain tumor; its location is complex and is difficult to remove surgically. To diagnosis the brain tumor, doctors can precisely diagnose and localize the disease using medical images. However, the computer-assisted diagnosis for the brain tumor diagnosis is still the problem because the rough segmentation of the brain tumor makes the internal grade of the tumor incorrect. METHODS: In this paper, we proposed an Aggregation-and-Attention Network for brain tumor segmentation. The proposed network takes the U-Net as the backbone, aggregates multi-scale semantic information, and focuses on crucial information to perform brain tumor segmentation. To this end, we proposed an enhanced down-sampling module and Up-Sampling Layer to compensate for the information loss. The multi-scale connection module is to construct the multi-receptive semantic fusion between encoder and decoder. Furthermore, we designed a dual-attention fusion module that can extract and enhance the spatial relationship of magnetic resonance imaging and applied the strategy of deep supervision in different parts of the proposed network. RESULTS: Experimental results show that the performance of the proposed framework is the best on the BraTS2020 dataset, compared with the-state-of-art networks. The performance of the proposed framework surpasses all the comparison networks, and its average accuracies of the four indexes are 0.860, 0.885, 0.932, and 1.2325, respectively. CONCLUSIONS: The framework and modules of the proposed framework are scientific and practical, which can extract and aggregate useful semantic information and enhance the ability of glioma segmentation. BioMed Central 2021-07-09 /pmc/articles/PMC8267236/ /pubmed/34243703 http://dx.doi.org/10.1186/s12880-021-00639-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Technical Advance
Lin, Chih-Wei
Hong, Yu
Liu, Jinfu
Aggregation-and-Attention Network for brain tumor segmentation
title Aggregation-and-Attention Network for brain tumor segmentation
title_full Aggregation-and-Attention Network for brain tumor segmentation
title_fullStr Aggregation-and-Attention Network for brain tumor segmentation
title_full_unstemmed Aggregation-and-Attention Network for brain tumor segmentation
title_short Aggregation-and-Attention Network for brain tumor segmentation
title_sort aggregation-and-attention network for brain tumor segmentation
topic Technical Advance
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8267236/
https://www.ncbi.nlm.nih.gov/pubmed/34243703
http://dx.doi.org/10.1186/s12880-021-00639-8
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