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Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor

In the present study, a DNAzyme was screened in vitro through the use of a DNA library and crude extracellular mixture (CEM) of Pseudomonas aeruginosa. Following eight rounds of selection, a DNAzyme termed PAE‐1 was obtained, which displayed high rates of cleavage with strong specificity. A fluoresc...

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Autores principales: Qin, Mingcan, Ma, Xiaoyi, Fan, Shihui, Wu, Hangjie, Yan, Wanli, Tian, Xiaopeng, Lu, Jing, Lyu, Mingsheng, Wang, Shujun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8269565/
https://www.ncbi.nlm.nih.gov/pubmed/34262744
http://dx.doi.org/10.1002/fsn3.2367
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author Qin, Mingcan
Ma, Xiaoyi
Fan, Shihui
Wu, Hangjie
Yan, Wanli
Tian, Xiaopeng
Lu, Jing
Lyu, Mingsheng
Wang, Shujun
author_facet Qin, Mingcan
Ma, Xiaoyi
Fan, Shihui
Wu, Hangjie
Yan, Wanli
Tian, Xiaopeng
Lu, Jing
Lyu, Mingsheng
Wang, Shujun
author_sort Qin, Mingcan
collection PubMed
description In the present study, a DNAzyme was screened in vitro through the use of a DNA library and crude extracellular mixture (CEM) of Pseudomonas aeruginosa. Following eight rounds of selection, a DNAzyme termed PAE‐1 was obtained, which displayed high rates of cleavage with strong specificity. A fluorescent biosensor was designed for the detection of P. aeruginosa in combination with the DNAzyme. A detection limit as low as 1.2 cfu/ml was observed. Using proteases and filtration, it was determined that the target was a protein with a molecular weight of 10 kDa–50 kDa. The DNAzyme was combined with a polystyrene board to construct a simple indicator plate sensor which produced a color that identified the target within 10 min. The results were reliable when tap water and food samples were tested. The present study provides a novel experimental strategy for the development of sensors based on a DNAzyme to rapidly detect P. aeruginosa in the field.
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spelling pubmed-82695652021-07-13 Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor Qin, Mingcan Ma, Xiaoyi Fan, Shihui Wu, Hangjie Yan, Wanli Tian, Xiaopeng Lu, Jing Lyu, Mingsheng Wang, Shujun Food Sci Nutr Original Research In the present study, a DNAzyme was screened in vitro through the use of a DNA library and crude extracellular mixture (CEM) of Pseudomonas aeruginosa. Following eight rounds of selection, a DNAzyme termed PAE‐1 was obtained, which displayed high rates of cleavage with strong specificity. A fluorescent biosensor was designed for the detection of P. aeruginosa in combination with the DNAzyme. A detection limit as low as 1.2 cfu/ml was observed. Using proteases and filtration, it was determined that the target was a protein with a molecular weight of 10 kDa–50 kDa. The DNAzyme was combined with a polystyrene board to construct a simple indicator plate sensor which produced a color that identified the target within 10 min. The results were reliable when tap water and food samples were tested. The present study provides a novel experimental strategy for the development of sensors based on a DNAzyme to rapidly detect P. aeruginosa in the field. John Wiley and Sons Inc. 2021-06-11 /pmc/articles/PMC8269565/ /pubmed/34262744 http://dx.doi.org/10.1002/fsn3.2367 Text en © 2021 The Authors. Food Science & Nutrition published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Qin, Mingcan
Ma, Xiaoyi
Fan, Shihui
Wu, Hangjie
Yan, Wanli
Tian, Xiaopeng
Lu, Jing
Lyu, Mingsheng
Wang, Shujun
Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor
title Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor
title_full Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor
title_fullStr Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor
title_full_unstemmed Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor
title_short Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor
title_sort rapid detection of pseudomonas aeruginosa using a dnazyme‐based sensor
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8269565/
https://www.ncbi.nlm.nih.gov/pubmed/34262744
http://dx.doi.org/10.1002/fsn3.2367
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