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Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor
In the present study, a DNAzyme was screened in vitro through the use of a DNA library and crude extracellular mixture (CEM) of Pseudomonas aeruginosa. Following eight rounds of selection, a DNAzyme termed PAE‐1 was obtained, which displayed high rates of cleavage with strong specificity. A fluoresc...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8269565/ https://www.ncbi.nlm.nih.gov/pubmed/34262744 http://dx.doi.org/10.1002/fsn3.2367 |
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author | Qin, Mingcan Ma, Xiaoyi Fan, Shihui Wu, Hangjie Yan, Wanli Tian, Xiaopeng Lu, Jing Lyu, Mingsheng Wang, Shujun |
author_facet | Qin, Mingcan Ma, Xiaoyi Fan, Shihui Wu, Hangjie Yan, Wanli Tian, Xiaopeng Lu, Jing Lyu, Mingsheng Wang, Shujun |
author_sort | Qin, Mingcan |
collection | PubMed |
description | In the present study, a DNAzyme was screened in vitro through the use of a DNA library and crude extracellular mixture (CEM) of Pseudomonas aeruginosa. Following eight rounds of selection, a DNAzyme termed PAE‐1 was obtained, which displayed high rates of cleavage with strong specificity. A fluorescent biosensor was designed for the detection of P. aeruginosa in combination with the DNAzyme. A detection limit as low as 1.2 cfu/ml was observed. Using proteases and filtration, it was determined that the target was a protein with a molecular weight of 10 kDa–50 kDa. The DNAzyme was combined with a polystyrene board to construct a simple indicator plate sensor which produced a color that identified the target within 10 min. The results were reliable when tap water and food samples were tested. The present study provides a novel experimental strategy for the development of sensors based on a DNAzyme to rapidly detect P. aeruginosa in the field. |
format | Online Article Text |
id | pubmed-8269565 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82695652021-07-13 Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor Qin, Mingcan Ma, Xiaoyi Fan, Shihui Wu, Hangjie Yan, Wanli Tian, Xiaopeng Lu, Jing Lyu, Mingsheng Wang, Shujun Food Sci Nutr Original Research In the present study, a DNAzyme was screened in vitro through the use of a DNA library and crude extracellular mixture (CEM) of Pseudomonas aeruginosa. Following eight rounds of selection, a DNAzyme termed PAE‐1 was obtained, which displayed high rates of cleavage with strong specificity. A fluorescent biosensor was designed for the detection of P. aeruginosa in combination with the DNAzyme. A detection limit as low as 1.2 cfu/ml was observed. Using proteases and filtration, it was determined that the target was a protein with a molecular weight of 10 kDa–50 kDa. The DNAzyme was combined with a polystyrene board to construct a simple indicator plate sensor which produced a color that identified the target within 10 min. The results were reliable when tap water and food samples were tested. The present study provides a novel experimental strategy for the development of sensors based on a DNAzyme to rapidly detect P. aeruginosa in the field. John Wiley and Sons Inc. 2021-06-11 /pmc/articles/PMC8269565/ /pubmed/34262744 http://dx.doi.org/10.1002/fsn3.2367 Text en © 2021 The Authors. Food Science & Nutrition published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Qin, Mingcan Ma, Xiaoyi Fan, Shihui Wu, Hangjie Yan, Wanli Tian, Xiaopeng Lu, Jing Lyu, Mingsheng Wang, Shujun Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor |
title | Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor |
title_full | Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor |
title_fullStr | Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor |
title_full_unstemmed | Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor |
title_short | Rapid detection of Pseudomonas aeruginosa using a DNAzyme‐based sensor |
title_sort | rapid detection of pseudomonas aeruginosa using a dnazyme‐based sensor |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8269565/ https://www.ncbi.nlm.nih.gov/pubmed/34262744 http://dx.doi.org/10.1002/fsn3.2367 |
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