Cargando…

Asbestos Detection with Fluorescence Microscopy Images and Deep Learning

Fluorescent probes can be used to detect various types of asbestos (serpentine and amphibole groups); however, the fiber counting using our previously developed software was not accurate for samples with low fiber concentration. Machine learning-based techniques (e.g., deep learning) for image analy...

Descripción completa

Detalles Bibliográficos
Autores principales: Cai, Changjie, Nishimura, Tomoki, Hwang, Jooyeon, Hu, Xiao-Ming, Kuroda, Akio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8272007/
https://www.ncbi.nlm.nih.gov/pubmed/34283157
http://dx.doi.org/10.3390/s21134582
_version_ 1783721124841914368
author Cai, Changjie
Nishimura, Tomoki
Hwang, Jooyeon
Hu, Xiao-Ming
Kuroda, Akio
author_facet Cai, Changjie
Nishimura, Tomoki
Hwang, Jooyeon
Hu, Xiao-Ming
Kuroda, Akio
author_sort Cai, Changjie
collection PubMed
description Fluorescent probes can be used to detect various types of asbestos (serpentine and amphibole groups); however, the fiber counting using our previously developed software was not accurate for samples with low fiber concentration. Machine learning-based techniques (e.g., deep learning) for image analysis, particularly Convolutional Neural Networks (CNN), have been widely applied to many areas. The objectives of this study were to (1) create a database of a wide-range asbestos concentration (0–50 fibers/liter) fluorescence microscopy (FM) images in the laboratory; and (2) determine the applicability of the state-of-the-art object detection CNN model, YOLOv4, to accurately detect asbestos. We captured the fluorescence microscopy images containing asbestos and labeled the individual asbestos in the images. We trained the YOLOv4 model with the labeled images using one GTX 1660 Ti Graphics Processing Unit (GPU). Our results demonstrated the exceptional capacity of the YOLOv4 model to learn the fluorescent asbestos morphologies. The mean average precision at a threshold of 0.5 (mAP@0.5) was 96.1% ± 0.4%, using the National Institute for Occupational Safety and Health (NIOSH) fiber counting Method 7400 as a reference method. Compared to our previous counting software (Intec/HU), the YOLOv4 achieved higher accuracy (0.997 vs. 0.979), particularly much higher precision (0.898 vs. 0.418), recall (0.898 vs. 0.780) and F-1 score (0.898 vs. 0.544). In addition, the YOLOv4 performed much better for low fiber concentration samples (<15 fibers/liter) compared to Intec/HU. Therefore, the FM method coupled with YOLOv4 is remarkable in detecting asbestos fibers and differentiating them from other non-asbestos particles.
format Online
Article
Text
id pubmed-8272007
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-82720072021-07-11 Asbestos Detection with Fluorescence Microscopy Images and Deep Learning Cai, Changjie Nishimura, Tomoki Hwang, Jooyeon Hu, Xiao-Ming Kuroda, Akio Sensors (Basel) Communication Fluorescent probes can be used to detect various types of asbestos (serpentine and amphibole groups); however, the fiber counting using our previously developed software was not accurate for samples with low fiber concentration. Machine learning-based techniques (e.g., deep learning) for image analysis, particularly Convolutional Neural Networks (CNN), have been widely applied to many areas. The objectives of this study were to (1) create a database of a wide-range asbestos concentration (0–50 fibers/liter) fluorescence microscopy (FM) images in the laboratory; and (2) determine the applicability of the state-of-the-art object detection CNN model, YOLOv4, to accurately detect asbestos. We captured the fluorescence microscopy images containing asbestos and labeled the individual asbestos in the images. We trained the YOLOv4 model with the labeled images using one GTX 1660 Ti Graphics Processing Unit (GPU). Our results demonstrated the exceptional capacity of the YOLOv4 model to learn the fluorescent asbestos morphologies. The mean average precision at a threshold of 0.5 (mAP@0.5) was 96.1% ± 0.4%, using the National Institute for Occupational Safety and Health (NIOSH) fiber counting Method 7400 as a reference method. Compared to our previous counting software (Intec/HU), the YOLOv4 achieved higher accuracy (0.997 vs. 0.979), particularly much higher precision (0.898 vs. 0.418), recall (0.898 vs. 0.780) and F-1 score (0.898 vs. 0.544). In addition, the YOLOv4 performed much better for low fiber concentration samples (<15 fibers/liter) compared to Intec/HU. Therefore, the FM method coupled with YOLOv4 is remarkable in detecting asbestos fibers and differentiating them from other non-asbestos particles. MDPI 2021-07-04 /pmc/articles/PMC8272007/ /pubmed/34283157 http://dx.doi.org/10.3390/s21134582 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Cai, Changjie
Nishimura, Tomoki
Hwang, Jooyeon
Hu, Xiao-Ming
Kuroda, Akio
Asbestos Detection with Fluorescence Microscopy Images and Deep Learning
title Asbestos Detection with Fluorescence Microscopy Images and Deep Learning
title_full Asbestos Detection with Fluorescence Microscopy Images and Deep Learning
title_fullStr Asbestos Detection with Fluorescence Microscopy Images and Deep Learning
title_full_unstemmed Asbestos Detection with Fluorescence Microscopy Images and Deep Learning
title_short Asbestos Detection with Fluorescence Microscopy Images and Deep Learning
title_sort asbestos detection with fluorescence microscopy images and deep learning
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8272007/
https://www.ncbi.nlm.nih.gov/pubmed/34283157
http://dx.doi.org/10.3390/s21134582
work_keys_str_mv AT caichangjie asbestosdetectionwithfluorescencemicroscopyimagesanddeeplearning
AT nishimuratomoki asbestosdetectionwithfluorescencemicroscopyimagesanddeeplearning
AT hwangjooyeon asbestosdetectionwithfluorescencemicroscopyimagesanddeeplearning
AT huxiaoming asbestosdetectionwithfluorescencemicroscopyimagesanddeeplearning
AT kurodaakio asbestosdetectionwithfluorescencemicroscopyimagesanddeeplearning