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A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions

Phenotypic characteristics of fruit particles, such as projection area, can reflect the growth status and physiological changes of grapes. However, complex backgrounds and overlaps always constrain accurate grape border recognition and detection of fruit particles. Therefore, this paper proposes a t...

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Detalles Bibliográficos
Autores principales: Miao, Yubin, Huang, Leilei, Zhang, Shu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8272069/
https://www.ncbi.nlm.nih.gov/pubmed/34283081
http://dx.doi.org/10.3390/s21134532
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author Miao, Yubin
Huang, Leilei
Zhang, Shu
author_facet Miao, Yubin
Huang, Leilei
Zhang, Shu
author_sort Miao, Yubin
collection PubMed
description Phenotypic characteristics of fruit particles, such as projection area, can reflect the growth status and physiological changes of grapes. However, complex backgrounds and overlaps always constrain accurate grape border recognition and detection of fruit particles. Therefore, this paper proposes a two-step phenotypic parameter measurement to calculate areas of overlapped grape particles. These two steps contain particle edge detection and contour fitting. For particle edge detection, an improved HED network is introduced. It makes full use of outputs of each convolutional layer, introduces Dice coefficients to original weighted cross-entropy loss function, and applies image pyramids to achieve multi-scale image edge detection. For contour fitting, an iterative least squares ellipse fitting and region growth algorithm is proposed to calculate the area of grapes. Experiments showed that in the edge detection step, compared with current prevalent methods including Canny, HED, and DeepEdge, the improved HED was able to extract the edges of detected fruit particles more clearly, accurately, and efficiently. It could also detect overlapping grape contours more completely. In the shape-fitting step, our method achieved an average error of 1.5% in grape area estimation. Therefore, this study provides convenient means and measures for extraction of grape phenotype characteristics and the grape growth law.
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spelling pubmed-82720692021-07-11 A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions Miao, Yubin Huang, Leilei Zhang, Shu Sensors (Basel) Article Phenotypic characteristics of fruit particles, such as projection area, can reflect the growth status and physiological changes of grapes. However, complex backgrounds and overlaps always constrain accurate grape border recognition and detection of fruit particles. Therefore, this paper proposes a two-step phenotypic parameter measurement to calculate areas of overlapped grape particles. These two steps contain particle edge detection and contour fitting. For particle edge detection, an improved HED network is introduced. It makes full use of outputs of each convolutional layer, introduces Dice coefficients to original weighted cross-entropy loss function, and applies image pyramids to achieve multi-scale image edge detection. For contour fitting, an iterative least squares ellipse fitting and region growth algorithm is proposed to calculate the area of grapes. Experiments showed that in the edge detection step, compared with current prevalent methods including Canny, HED, and DeepEdge, the improved HED was able to extract the edges of detected fruit particles more clearly, accurately, and efficiently. It could also detect overlapping grape contours more completely. In the shape-fitting step, our method achieved an average error of 1.5% in grape area estimation. Therefore, this study provides convenient means and measures for extraction of grape phenotype characteristics and the grape growth law. MDPI 2021-07-01 /pmc/articles/PMC8272069/ /pubmed/34283081 http://dx.doi.org/10.3390/s21134532 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Miao, Yubin
Huang, Leilei
Zhang, Shu
A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions
title A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions
title_full A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions
title_fullStr A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions
title_full_unstemmed A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions
title_short A Two-Step Phenotypic Parameter Measurement Strategy for Overlapped Grapes under Different Light Conditions
title_sort two-step phenotypic parameter measurement strategy for overlapped grapes under different light conditions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8272069/
https://www.ncbi.nlm.nih.gov/pubmed/34283081
http://dx.doi.org/10.3390/s21134532
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