Cargando…

Detecting lncRNA–Cancer Associations by Combining miRNAs, Genes, and Prognosis With Matrix Factorization

Motivation: Long non-coding RNAs (lncRNAs) play important roles in cancer development. Prediction of lncRNA–cancer association is necessary for efficiently discovering biomarkers and designing treatment for cancers. Currently, several methods have been developed to predict lncRNA–cancer associations...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yan, Huan, Chai, Hua, Zhao, Huiying
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2021
Materias:	Genetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8273282/ https://www.ncbi.nlm.nih.gov/pubmed/34262591 http://dx.doi.org/10.3389/fgene.2021.639872

Ejemplares similares

LncRNA–miRNA–mRNA Networks of Gastrointestinal Cancers Representing Common and Specific LncRNAs and mRNAs
por: Dastsooz, Hassan, et al.
Publicado: (2022)

Reconstruction and Analysis of the lncRNA-miRNA-mRNA Network Based on Competitive Endogenous RNA Reveal Functional lncRNAs in Dilated Cardiomyopathy
por: Tao, Lichan, et al.
Publicado: (2019)

Predicting lncRNA–Protein Interactions With miRNAs as Mediators in a Heterogeneous Network Model
por: Zhou, Yuan-Ke, et al.
Publicado: (2020)

Integrated Dissection of lncRNA-miRNA-mRNA Pairs and Potential Regulatory Role of lncRNA PCAT19 in Lung Adenocarcinoma
por: Tang, Xiaomei, et al.
Publicado: (2022)

SPCMLMI: A structural perturbation-based matrix completion method to predict lncRNA–miRNA interactions
por: Wang, Mei-Neng, et al.
Publicado: (2022)

Corrigendum: Reconstruction and Analysis of the lncRNA-miRNA-mRNA Network Based on Competitive Endogenous RNA Reveal Functional lncRNAs in Dilated Cardiomyopathy
por: Tao, Lichan, et al.
Publicado: (2022)

Construction and Characterization of a Synergistic lncRNA–miRNA Network Reveals a Crucial and Prognostic Role of lncRNAs in Colon Cancer
por: Zhao, Bin, et al.
Publicado: (2020)

Characterization of lncRNA–miRNA–mRNA Network to Reveal Potential Functional ceRNAs in Bovine Skeletal Muscle
por: Yue, Binglin, et al.
Publicado: (2019)

Prognostic lncRNA, miRNA, and mRNA Signatures in Papillary Thyroid Carcinoma
por: Wang, Kun, et al.
Publicado: (2020)

Predicting lncRNA-miRNA Interaction via Graph Convolution Auto-Encoder
por: Huang, Yu-An, et al.
Publicado: (2019)

Identification of the lncRNA–miRNA‒mRNA regulatory network for middle cerebral artery occlusion-induced ischemic stroke
por: Shi, Guixin, et al.
Publicado: (2023)

The Identification and Analysis of mRNA–lncRNA–miRNA Cliques From the Integrative Network of Ovarian Cancer
por: Zhou, You, et al.
Publicado: (2019)

Construction of a potentially functional lncRNA-miRNA-mRNA network in sepsis by bioinformatics analysis
por: Zheng, Li-ming, et al.
Publicado: (2022)

Identification of lncRNA/circRNA-miRNA-mRNA ceRNA Network as Biomarkers for Hepatocellular Carcinoma
por: Chen, Shanshan, et al.
Publicado: (2022)

Deregulation of ncRNA in Neurodegenerative Disease: Focus on circRNA, lncRNA and miRNA in Amyotrophic Lateral Sclerosis
por: Ruffo, Paola, et al.
Publicado: (2021)

Comprehensive Analysis of Differentially Expressed lncRNAs miRNAs and mRNA and Their ceRNA Network of Patients With Rare-Earth Pneumoconiosis
por: Shi, Xue-min, et al.
Publicado: (2021)

Identification of the Key Factors Related to Bladder Cancer by lncRNA-miRNA-mRNA Three-Layer Network
por: Wang, Xiaxia, et al.
Publicado: (2020)

Identification of a 5-lncRNA-Based Signature for Immune Characteristics and Prognosis of Lung Squamous Cell Carcinoma and Verification of the Function of lncRNA SPATA41
por: Huan, Sheng, et al.
Publicado: (2022)

Integrated Analysis of Angiogenesis Related lncRNA-miRNA-mRNA in Patients With Coronary Chronic Total Occlusion Disease
por: Gao, Wei, et al.
Publicado: (2022)

Comprehensive Analysis of lncRNAs, miRNAs and mRNAs in Mouse Hippocampus With Hepatic Encephalopathy
por: Zhang, Huijie, et al.
Publicado: (2022)

Editorial: Exosomes, miRNAs, and lncRNAs in breast cancer: Therapeutic and diagnostic applications
por: Hashemi, Zahra Sadat, et al.
Publicado: (2023)

Metabolic Regulations by lncRNA, miRNA, and ceRNA Under Grass-Fed and Grain-Fed Regimens in Angus Beef Cattle
por: Jia, Cunling, et al.
Publicado: (2021)

Analysis of the lncRNA–miRNA–mRNA Network Reveals a Potential Regulatory Mechanism of EGFR-TKI Resistance in NSCLC
por: Ding, Dandan, et al.
Publicado: (2022)

Integrated Analysis of lncRNA-miRNA-mRNA ceRNA Network Identified lncRNA EPB41L4A-AS1 as a Potential Biomarker in Non-small Cell Lung Cancer
por: Wang, Meiqi, et al.
Publicado: (2020)

An integrative analysis of an lncRNA–mRNA competing endogenous RNA network to identify functional lncRNAs in uterine leiomyomas with RNA sequencing
por: Meng, Fanfei, et al.
Publicado: (2023)

Combined analysis of differentially expressed lncRNAs and miRNAs in liver tissues of high-fat fed rabbits by transcriptome sequencing
por: Wang, Jie, et al.
Publicado: (2022)

A novel lipid metabolism-related lncRNA signature predictive of clinical prognosis in cervical cancer
por: Lu, Yanzhen, et al.
Publicado: (2022)

An Immune Gene-Related Five-lncRNA Signature for to Predict Glioma Prognosis
por: Wang, Xinzhuang, et al.
Publicado: (2020)

MIMRDA: A Method Incorporating the miRNA and mRNA Expression Profiles for Predicting miRNA-Disease Associations to Identify Key miRNAs (microRNAs)
por: Li, Xianbin, et al.
Publicado: (2022)

Identification of cancer-related miRNA-lncRNA biomarkers using a basic miRNA-lncRNA network
por: Zhang, Guangle, et al.
Publicado: (2018)

Comprehensive Analysis of lncRNA and miRNA Regulatory Network Reveals Potential Prognostic Non-coding RNA Involved in Breast Cancer Progression
por: Gao, Sheng, et al.
Publicado: (2021)

Dysregulated lncRNA-miRNA-mRNA Network Reveals Patient Survival-Associated Modules and RNA Binding Proteins in Invasive Breast Carcinoma
por: Dong, Yu, et al.
Publicado: (2020)

An integrative analysis of the lncRNA-miRNA-mRNA competitive endogenous RNA network reveals potential mechanisms in the murine hair follicle cycle
por: Ding, Yuxin, et al.
Publicado: (2022)

Identification of Autophagy-Related LncRNA to Predict the Prognosis of Colorectal Cancer
por: Duan, Ling, et al.
Publicado: (2022)

Comprehensive Analysis of Survival-Related lncRNAs, miRNAs, and mRNAs Forming a Competing Endogenous RNA Network in Gastric Cancer
por: Zhao, Yanjie, et al.
Publicado: (2021)

Predicting lncRNA–Protein Interaction With Weighted Graph-Regularized Matrix Factorization
por: Sun, Xibo, et al.
Publicado: (2021)

Identifying Potential miRNAs–Disease Associations With Probability Matrix Factorization
por: Xu, Junlin, et al.
Publicado: (2019)

Identification of Hub lncRNAs Along With lncRNA-miRNA-mRNA Network for Effective Diagnosis and Prognosis of Papillary Thyroid Cancer
por: Li, Haiyan, et al.
Publicado: (2021)

Transcriptomic Analysis Reveals the Involvement of lncRNA–miRNA–mRNA Networks in Hair Follicle Induction in Aohan Fine Wool Sheep Skin
por: Zhao, Ranran, et al.
Publicado: (2020)

Construction and Comprehensive Prognostic Analysis of a lncRNA–miRNA–mRNA Regulatory Network and Tumor Immune Cell Infiltration in Colorectal Cancer
por: Guo, Xiong, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_rl11mhp5j0nb3blqdt58vn5lee