The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis

The high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of Gentianopsis grandis, and we analyzed its structural characteristics and phylogenetic relationships. The complete chloroplast genome of G. grandis was 151,271 bp in length, consisting of a large sin...

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Detalles Bibliográficos
Autores principales: Li, Hailing, Zhao, Jingjing, Zhou, Nong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8274530/
https://www.ncbi.nlm.nih.gov/pubmed/34291164
http://dx.doi.org/10.1080/23802359.2021.1947910
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author Li, Hailing
Zhao, Jingjing
Zhou, Nong
author_facet Li, Hailing
Zhao, Jingjing
Zhou, Nong
author_sort Li, Hailing
collection PubMed
description The high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of Gentianopsis grandis, and we analyzed its structural characteristics and phylogenetic relationships. The complete chloroplast genome of G. grandis was 151,271 bp in length, consisting of a large single copy (LSC) region of 82,572 bp and a small single copy (SSC) region of 17,907 bp, which were separated by a pair of inverted repeat regions (IRs) of 25,396 bp. The annotation contained a total of 114 unique genes, including 78 protein-coding genes, 30 tRNA genes, four rRNA genes, and two pseudogenes. The phylogenetic analysis indicated the genus Gentianopsis was closely related to Halenia and Swertia.
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spelling pubmed-82745302021-07-20 The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis Li, Hailing Zhao, Jingjing Zhou, Nong Mitochondrial DNA B Resour Mitogenome Announcement The high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of Gentianopsis grandis, and we analyzed its structural characteristics and phylogenetic relationships. The complete chloroplast genome of G. grandis was 151,271 bp in length, consisting of a large single copy (LSC) region of 82,572 bp and a small single copy (SSC) region of 17,907 bp, which were separated by a pair of inverted repeat regions (IRs) of 25,396 bp. The annotation contained a total of 114 unique genes, including 78 protein-coding genes, 30 tRNA genes, four rRNA genes, and two pseudogenes. The phylogenetic analysis indicated the genus Gentianopsis was closely related to Halenia and Swertia. Taylor & Francis 2021-07-09 /pmc/articles/PMC8274530/ /pubmed/34291164 http://dx.doi.org/10.1080/23802359.2021.1947910 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Hailing
Zhao, Jingjing
Zhou, Nong
The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis
title The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis
title_full The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis
title_fullStr The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis
title_full_unstemmed The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis
title_short The complete chloroplast genome sequence of Gentianopsis grandis (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis
title_sort complete chloroplast genome sequence of gentianopsis grandis (harry sm.) ma (gentianaceae) and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8274530/
https://www.ncbi.nlm.nih.gov/pubmed/34291164
http://dx.doi.org/10.1080/23802359.2021.1947910
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