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Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses
Lectin receptor-like protein kinases (LecRLKs) have been shown to be involved in plants’ responses to various biotic and abiotic stresse factors. Cerasus humilis is an important fruit species widely planted for soil and water conservation in northern China due to its strong tolerance to drought and...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8274838/ https://www.ncbi.nlm.nih.gov/pubmed/34252163 http://dx.doi.org/10.1371/journal.pone.0254535 |
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author | Han, Hongyan Mu, Xiaopeng Wang, Pengfei Wang, Zewen Fu, Hongbo Gao, Yu Gary Du, Junjie |
author_facet | Han, Hongyan Mu, Xiaopeng Wang, Pengfei Wang, Zewen Fu, Hongbo Gao, Yu Gary Du, Junjie |
author_sort | Han, Hongyan |
collection | PubMed |
description | Lectin receptor-like protein kinases (LecRLKs) have been shown to be involved in plants’ responses to various biotic and abiotic stresse factors. Cerasus humilis is an important fruit species widely planted for soil and water conservation in northern China due to its strong tolerance to drought and salinity stresses. In this study, a total of 170 LecRLK family genes (125 G-types, 43 L-types and 2 C-types) were identified in the newly released whole-genome sequences of C. humilis. Furthermore, nine representative LecRLK genes in young plants of C. humilis under varying drought and salinity stresses were selected for qRT-PCR analysis. Our systematic comparative analyses revealed the active participation of these nine LecRLK genes in the salt and drought stress responses of C. humilis. The results from our study have provided a solid foundation for future functional verification of these LecRLK family genes and will likely help facilitate the more rapid and effective development of new stress resistant Cerasus humilis cultivars. |
format | Online Article Text |
id | pubmed-8274838 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-82748382021-07-27 Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses Han, Hongyan Mu, Xiaopeng Wang, Pengfei Wang, Zewen Fu, Hongbo Gao, Yu Gary Du, Junjie PLoS One Research Article Lectin receptor-like protein kinases (LecRLKs) have been shown to be involved in plants’ responses to various biotic and abiotic stresse factors. Cerasus humilis is an important fruit species widely planted for soil and water conservation in northern China due to its strong tolerance to drought and salinity stresses. In this study, a total of 170 LecRLK family genes (125 G-types, 43 L-types and 2 C-types) were identified in the newly released whole-genome sequences of C. humilis. Furthermore, nine representative LecRLK genes in young plants of C. humilis under varying drought and salinity stresses were selected for qRT-PCR analysis. Our systematic comparative analyses revealed the active participation of these nine LecRLK genes in the salt and drought stress responses of C. humilis. The results from our study have provided a solid foundation for future functional verification of these LecRLK family genes and will likely help facilitate the more rapid and effective development of new stress resistant Cerasus humilis cultivars. Public Library of Science 2021-07-12 /pmc/articles/PMC8274838/ /pubmed/34252163 http://dx.doi.org/10.1371/journal.pone.0254535 Text en © 2021 Han et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Han, Hongyan Mu, Xiaopeng Wang, Pengfei Wang, Zewen Fu, Hongbo Gao, Yu Gary Du, Junjie Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses |
title | Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses |
title_full | Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses |
title_fullStr | Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses |
title_full_unstemmed | Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses |
title_short | Identification of LecRLK gene family in Cerasus humilis through genomic-transcriptomic data mining and expression analyses |
title_sort | identification of lecrlk gene family in cerasus humilis through genomic-transcriptomic data mining and expression analyses |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8274838/ https://www.ncbi.nlm.nih.gov/pubmed/34252163 http://dx.doi.org/10.1371/journal.pone.0254535 |
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