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Translation role of circRNAs in cancers

Circular RNAs (circRNAs) constitute a class of covalently closed RNA molecules. With the continuous advancement of high‐throughput sequencing technology and bioinformatics tools, many circRNAs have been identified in various human tissues and cell lines. Notably, recent studies have indicated that s...

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Autores principales: Lu, Yaqin, Li, Zhe, Lin, Chen, Zhang, Jian, Shen, Zhisen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8275004/
https://www.ncbi.nlm.nih.gov/pubmed/34097315
http://dx.doi.org/10.1002/jcla.23866
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author Lu, Yaqin
Li, Zhe
Lin, Chen
Zhang, Jian
Shen, Zhisen
author_facet Lu, Yaqin
Li, Zhe
Lin, Chen
Zhang, Jian
Shen, Zhisen
author_sort Lu, Yaqin
collection PubMed
description Circular RNAs (circRNAs) constitute a class of covalently closed RNA molecules. With the continuous advancement of high‐throughput sequencing technology and bioinformatics tools, many circRNAs have been identified in various human tissues and cell lines. Notably, recent studies have indicated that some circRNAs have translational functions. Internal ribosome entry sites and the N6‐methyladenosine modification mediate cap‐independent translation. This review describes these two translation mechanisms and verification methods at the molecular level. Databases (including ORF Finder, Pfam, BLASTp, CircRNADb, CircBase, CircPro, CircCode, IRESite, IRESbase) were used to analyze whether circRNAs have the structural characteristic of translation. CircRNA minigene reporter system containing green fluorescent protein (GFP) confirmed the translation potential of circRNAs. Also, we briefly summarize the roles of proteins/peptides encoded by circRNAs (circFBXW7, circFNDC3B, circLgr4, circPPP1R12A, circMAPK1, circβ‐catenin, circGprc5a, circ‐SHPRH, circPINTexon2, circAKT3) that have been verified thus far in human cancers (triple‐negative breast cancer, colon cancer, gastric cancer, hepatocellular carcinoma, bladder cancer, glioblastoma). Those findings suggest circRNAs have a great implication in translation of the human genome.
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spelling pubmed-82750042021-07-15 Translation role of circRNAs in cancers Lu, Yaqin Li, Zhe Lin, Chen Zhang, Jian Shen, Zhisen J Clin Lab Anal Review Article Circular RNAs (circRNAs) constitute a class of covalently closed RNA molecules. With the continuous advancement of high‐throughput sequencing technology and bioinformatics tools, many circRNAs have been identified in various human tissues and cell lines. Notably, recent studies have indicated that some circRNAs have translational functions. Internal ribosome entry sites and the N6‐methyladenosine modification mediate cap‐independent translation. This review describes these two translation mechanisms and verification methods at the molecular level. Databases (including ORF Finder, Pfam, BLASTp, CircRNADb, CircBase, CircPro, CircCode, IRESite, IRESbase) were used to analyze whether circRNAs have the structural characteristic of translation. CircRNA minigene reporter system containing green fluorescent protein (GFP) confirmed the translation potential of circRNAs. Also, we briefly summarize the roles of proteins/peptides encoded by circRNAs (circFBXW7, circFNDC3B, circLgr4, circPPP1R12A, circMAPK1, circβ‐catenin, circGprc5a, circ‐SHPRH, circPINTexon2, circAKT3) that have been verified thus far in human cancers (triple‐negative breast cancer, colon cancer, gastric cancer, hepatocellular carcinoma, bladder cancer, glioblastoma). Those findings suggest circRNAs have a great implication in translation of the human genome. John Wiley and Sons Inc. 2021-06-07 /pmc/articles/PMC8275004/ /pubmed/34097315 http://dx.doi.org/10.1002/jcla.23866 Text en © 2021 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Lu, Yaqin
Li, Zhe
Lin, Chen
Zhang, Jian
Shen, Zhisen
Translation role of circRNAs in cancers
title Translation role of circRNAs in cancers
title_full Translation role of circRNAs in cancers
title_fullStr Translation role of circRNAs in cancers
title_full_unstemmed Translation role of circRNAs in cancers
title_short Translation role of circRNAs in cancers
title_sort translation role of circrnas in cancers
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8275004/
https://www.ncbi.nlm.nih.gov/pubmed/34097315
http://dx.doi.org/10.1002/jcla.23866
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