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Umibato: estimation of time-varying microbial interaction using continuous-time regression hidden Markov model

MOTIVATION: Accumulating evidence has highlighted the importance of microbial interaction networks. Methods have been developed for estimating microbial interaction networks, of which the generalized Lotka–Volterra equation (gLVE)-based method can estimate a directed interaction network. The previou...

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Detalles Bibliográficos
Autores principales:	Hosoda, Shion, Fukunaga, Tsukasa, Hamada, Michiaki
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2021
Materias:	Bioinformatics of Microbes and Microbiomes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8275348/ https://www.ncbi.nlm.nih.gov/pubmed/34252954 http://dx.doi.org/10.1093/bioinformatics/btab287

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