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Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach

Recently, the program INTMSAlign_HiSol for identifying aggregation hotspots in proteins only requiring secondary structure data was introduced. We explored the utility of this program further and applied it for engineering of the aldoxime dehydratase from Bacillus sp. OxB-1. Towards this end, the ef...

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Autores principales: Oike, Keiko, Sproß, Jens, Matsui, Daisuke, Asano, Yasuhisa, Gröger, Harald
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8275659/
https://www.ncbi.nlm.nih.gov/pubmed/34253740
http://dx.doi.org/10.1038/s41598-021-92749-0
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author Oike, Keiko
Sproß, Jens
Matsui, Daisuke
Asano, Yasuhisa
Gröger, Harald
author_facet Oike, Keiko
Sproß, Jens
Matsui, Daisuke
Asano, Yasuhisa
Gröger, Harald
author_sort Oike, Keiko
collection PubMed
description Recently, the program INTMSAlign_HiSol for identifying aggregation hotspots in proteins only requiring secondary structure data was introduced. We explored the utility of this program further and applied it for engineering of the aldoxime dehydratase from Bacillus sp. OxB-1. Towards this end, the effect of inverting the hydropathy at selected positions of the amino acid sequence on the enzymatic activity was studied leading to 60% of our constructed variants, which showed improved activity. In part, this activity increase can be rationalised by an improved heme incorporation of the variants. For example, a single mutation gave a 1.8 fold increased enzymatic activity and 30% improved absolute heme incorporation.
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spelling pubmed-82756592021-07-13 Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach Oike, Keiko Sproß, Jens Matsui, Daisuke Asano, Yasuhisa Gröger, Harald Sci Rep Article Recently, the program INTMSAlign_HiSol for identifying aggregation hotspots in proteins only requiring secondary structure data was introduced. We explored the utility of this program further and applied it for engineering of the aldoxime dehydratase from Bacillus sp. OxB-1. Towards this end, the effect of inverting the hydropathy at selected positions of the amino acid sequence on the enzymatic activity was studied leading to 60% of our constructed variants, which showed improved activity. In part, this activity increase can be rationalised by an improved heme incorporation of the variants. For example, a single mutation gave a 1.8 fold increased enzymatic activity and 30% improved absolute heme incorporation. Nature Publishing Group UK 2021-07-12 /pmc/articles/PMC8275659/ /pubmed/34253740 http://dx.doi.org/10.1038/s41598-021-92749-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Oike, Keiko
Sproß, Jens
Matsui, Daisuke
Asano, Yasuhisa
Gröger, Harald
Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach
title Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach
title_full Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach
title_fullStr Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach
title_full_unstemmed Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach
title_short Protein engineering of the aldoxime dehydratase from Bacillus sp. OxB-1 based on a rational sequence alignment approach
title_sort protein engineering of the aldoxime dehydratase from bacillus sp. oxb-1 based on a rational sequence alignment approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8275659/
https://www.ncbi.nlm.nih.gov/pubmed/34253740
http://dx.doi.org/10.1038/s41598-021-92749-0
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