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Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques
Numerous applications in diffusion MRI involve computing the orientationally-averaged diffusion-weighted signal. Most approaches implicitly assume, for a given b-value, that the gradient sampling vectors are uniformly distributed on a sphere (or ‘shell’), computing the orientationally-averaged signa...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8275746/ https://www.ncbi.nlm.nih.gov/pubmed/34253770 http://dx.doi.org/10.1038/s41598-021-93558-1 |
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author | Afzali, Maryam Knutsson, Hans Özarslan, Evren Jones, Derek K. |
author_facet | Afzali, Maryam Knutsson, Hans Özarslan, Evren Jones, Derek K. |
author_sort | Afzali, Maryam |
collection | PubMed |
description | Numerous applications in diffusion MRI involve computing the orientationally-averaged diffusion-weighted signal. Most approaches implicitly assume, for a given b-value, that the gradient sampling vectors are uniformly distributed on a sphere (or ‘shell’), computing the orientationally-averaged signal through simple arithmetic averaging. One challenge with this approach is that not all acquisition schemes have gradient sampling vectors distributed over perfect spheres. To ameliorate this challenge, alternative averaging methods include: weighted signal averaging; spherical harmonic representation of the signal in each shell; and using Mean Apparent Propagator MRI (MAP-MRI) to derive a three-dimensional signal representation and estimate its ‘isotropic part’. Here, these different methods are simulated and compared under different signal-to-noise (SNR) realizations. With sufficiently dense sampling points (61 orientations per shell), and isotropically-distributed sampling vectors, all averaging methods give comparable results, (MAP-MRI-based estimates give slightly higher accuracy, albeit with slightly elevated bias as b-value increases). As the SNR and number of data points per shell are reduced, MAP-MRI-based approaches give significantly higher accuracy compared with the other methods. We also apply these approaches to in vivo data where the results are broadly consistent with our simulations. A statistical analysis of the simulated data shows that the orientationally-averaged signals at each b-value are largely Gaussian distributed. |
format | Online Article Text |
id | pubmed-8275746 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-82757462021-07-13 Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques Afzali, Maryam Knutsson, Hans Özarslan, Evren Jones, Derek K. Sci Rep Article Numerous applications in diffusion MRI involve computing the orientationally-averaged diffusion-weighted signal. Most approaches implicitly assume, for a given b-value, that the gradient sampling vectors are uniformly distributed on a sphere (or ‘shell’), computing the orientationally-averaged signal through simple arithmetic averaging. One challenge with this approach is that not all acquisition schemes have gradient sampling vectors distributed over perfect spheres. To ameliorate this challenge, alternative averaging methods include: weighted signal averaging; spherical harmonic representation of the signal in each shell; and using Mean Apparent Propagator MRI (MAP-MRI) to derive a three-dimensional signal representation and estimate its ‘isotropic part’. Here, these different methods are simulated and compared under different signal-to-noise (SNR) realizations. With sufficiently dense sampling points (61 orientations per shell), and isotropically-distributed sampling vectors, all averaging methods give comparable results, (MAP-MRI-based estimates give slightly higher accuracy, albeit with slightly elevated bias as b-value increases). As the SNR and number of data points per shell are reduced, MAP-MRI-based approaches give significantly higher accuracy compared with the other methods. We also apply these approaches to in vivo data where the results are broadly consistent with our simulations. A statistical analysis of the simulated data shows that the orientationally-averaged signals at each b-value are largely Gaussian distributed. Nature Publishing Group UK 2021-07-12 /pmc/articles/PMC8275746/ /pubmed/34253770 http://dx.doi.org/10.1038/s41598-021-93558-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Afzali, Maryam Knutsson, Hans Özarslan, Evren Jones, Derek K. Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques |
title | Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques |
title_full | Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques |
title_fullStr | Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques |
title_full_unstemmed | Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques |
title_short | Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques |
title_sort | computing the orientational-average of diffusion-weighted mri signals: a comparison of different techniques |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8275746/ https://www.ncbi.nlm.nih.gov/pubmed/34253770 http://dx.doi.org/10.1038/s41598-021-93558-1 |
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