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Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data
AI-based data synthesis has seen rapid progress over the last several years and is increasingly recognized for its promise to enable privacy-respecting high-fidelity data sharing. This is reflected by the growing availability of both commercial and open-sourced software solutions for synthesizing pr...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8276128/ https://www.ncbi.nlm.nih.gov/pubmed/34268491 http://dx.doi.org/10.3389/fdata.2021.679939 |
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author | Platzer, Michael Reutterer, Thomas |
author_facet | Platzer, Michael Reutterer, Thomas |
author_sort | Platzer, Michael |
collection | PubMed |
description | AI-based data synthesis has seen rapid progress over the last several years and is increasingly recognized for its promise to enable privacy-respecting high-fidelity data sharing. This is reflected by the growing availability of both commercial and open-sourced software solutions for synthesizing private data. However, despite these recent advances, adequately evaluating the quality of generated synthetic datasets is still an open challenge. We aim to close this gap and introduce a novel holdout-based empirical assessment framework for quantifying the fidelity as well as the privacy risk of synthetic data solutions for mixed-type tabular data. Measuring fidelity is based on statistical distances of lower-dimensional marginal distributions, which provide a model-free and easy-to-communicate empirical metric for the representativeness of a synthetic dataset. Privacy risk is assessed by calculating the individual-level distances to closest record with respect to the training data. By showing that the synthetic samples are just as close to the training as to the holdout data, we yield strong evidence that the synthesizer indeed learned to generalize patterns and is independent of individual training records. We empirically demonstrate the presented framework for seven distinct synthetic data solutions across four mixed-type datasets and compare these then to traditional data perturbation techniques. Both a Python-based implementation of the proposed metrics and the demonstration study setup is made available open-source. The results highlight the need to systematically assess the fidelity just as well as the privacy of these emerging class of synthetic data generators. |
format | Online Article Text |
id | pubmed-8276128 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82761282021-07-14 Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data Platzer, Michael Reutterer, Thomas Front Big Data Big Data AI-based data synthesis has seen rapid progress over the last several years and is increasingly recognized for its promise to enable privacy-respecting high-fidelity data sharing. This is reflected by the growing availability of both commercial and open-sourced software solutions for synthesizing private data. However, despite these recent advances, adequately evaluating the quality of generated synthetic datasets is still an open challenge. We aim to close this gap and introduce a novel holdout-based empirical assessment framework for quantifying the fidelity as well as the privacy risk of synthetic data solutions for mixed-type tabular data. Measuring fidelity is based on statistical distances of lower-dimensional marginal distributions, which provide a model-free and easy-to-communicate empirical metric for the representativeness of a synthetic dataset. Privacy risk is assessed by calculating the individual-level distances to closest record with respect to the training data. By showing that the synthetic samples are just as close to the training as to the holdout data, we yield strong evidence that the synthesizer indeed learned to generalize patterns and is independent of individual training records. We empirically demonstrate the presented framework for seven distinct synthetic data solutions across four mixed-type datasets and compare these then to traditional data perturbation techniques. Both a Python-based implementation of the proposed metrics and the demonstration study setup is made available open-source. The results highlight the need to systematically assess the fidelity just as well as the privacy of these emerging class of synthetic data generators. Frontiers Media S.A. 2021-06-29 /pmc/articles/PMC8276128/ /pubmed/34268491 http://dx.doi.org/10.3389/fdata.2021.679939 Text en Copyright © 2021 Platzer and Reutterer. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Big Data Platzer, Michael Reutterer, Thomas Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data |
title | Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data |
title_full | Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data |
title_fullStr | Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data |
title_full_unstemmed | Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data |
title_short | Holdout-Based Empirical Assessment of Mixed-Type Synthetic Data |
title_sort | holdout-based empirical assessment of mixed-type synthetic data |
topic | Big Data |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8276128/ https://www.ncbi.nlm.nih.gov/pubmed/34268491 http://dx.doi.org/10.3389/fdata.2021.679939 |
work_keys_str_mv | AT platzermichael holdoutbasedempiricalassessmentofmixedtypesyntheticdata AT reuttererthomas holdoutbasedempiricalassessmentofmixedtypesyntheticdata |