The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species

The complete chloroplast genome of a staghorn fern species (Platycerium wallichii) was sequenced. The total genome was 158,286 bp in length, containing four regions: large single-copy (LSC) region (79,087 bp), small single-copy (SSC) region (21,397 bp), and two inverted repeat regions (IRs; 28,901 b...

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Autores principales: Wang, Kaikai, Duan, Jieqiu, Ding, Yong, Xiang, Jianying, Liu, Hongmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8276651/
https://www.ncbi.nlm.nih.gov/pubmed/34291168
http://dx.doi.org/10.1080/23802359.2021.1950057
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author Wang, Kaikai
Duan, Jieqiu
Ding, Yong
Xiang, Jianying
Liu, Hongmei
author_facet Wang, Kaikai
Duan, Jieqiu
Ding, Yong
Xiang, Jianying
Liu, Hongmei
author_sort Wang, Kaikai
collection PubMed
description The complete chloroplast genome of a staghorn fern species (Platycerium wallichii) was sequenced. The total genome was 158,286 bp in length, containing four regions: large single-copy (LSC) region (79,087 bp), small single-copy (SSC) region (21,397 bp), and two inverted repeat regions (IRs; 28,901 bp per each). In total 129 genes were annotated including 88 coding genes, 33 tRNAs, and 8 rRNAs. The overall GC content of the genome is 40.5%. Phylogenetic analysis supported the monophyly of both the subfamily Platycerioideae and the genus Platycerium. The genome data provides crucial information to support the future conservation and horticulture research.
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spelling pubmed-82766512021-07-20 The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species Wang, Kaikai Duan, Jieqiu Ding, Yong Xiang, Jianying Liu, Hongmei Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of a staghorn fern species (Platycerium wallichii) was sequenced. The total genome was 158,286 bp in length, containing four regions: large single-copy (LSC) region (79,087 bp), small single-copy (SSC) region (21,397 bp), and two inverted repeat regions (IRs; 28,901 bp per each). In total 129 genes were annotated including 88 coding genes, 33 tRNAs, and 8 rRNAs. The overall GC content of the genome is 40.5%. Phylogenetic analysis supported the monophyly of both the subfamily Platycerioideae and the genus Platycerium. The genome data provides crucial information to support the future conservation and horticulture research. Taylor & Francis 2021-07-09 /pmc/articles/PMC8276651/ /pubmed/34291168 http://dx.doi.org/10.1080/23802359.2021.1950057 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Kaikai
Duan, Jieqiu
Ding, Yong
Xiang, Jianying
Liu, Hongmei
The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species
title The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species
title_full The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species
title_fullStr The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species
title_full_unstemmed The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species
title_short The complete chloroplast genome of Platycerium wallichii (Polypodiaceae), an endangered and ornamental fern species
title_sort complete chloroplast genome of platycerium wallichii (polypodiaceae), an endangered and ornamental fern species
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8276651/
https://www.ncbi.nlm.nih.gov/pubmed/34291168
http://dx.doi.org/10.1080/23802359.2021.1950057
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