Cargando…

Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer

Comprehensive molecular profiling (CMP) plays an essential role in clinical decision making in metastatic non–small-cell lung cancer (mNSCLC). Circulating tumor DNA (ctDNA) analysis provides possibilities for molecular tumor profiling. In this study, we aim to explore the additional value of central...

Descripción completa

Detalles Bibliográficos
Autores principales: Schouten, Robert D., Vessies, Daan C. L., Bosch, Linda J. W., Barlo, Nicole P., van Lindert, Anne S. R., Cillessen, Saskia A. G. M., van den Broek, Daan, van den Heuvel, Michel M., Monkhorst, Kim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8277301/
https://www.ncbi.nlm.nih.gov/pubmed/34632253
http://dx.doi.org/10.1200/PO.20.00450
_version_ 1783722043703820288
author Schouten, Robert D.
Vessies, Daan C. L.
Bosch, Linda J. W.
Barlo, Nicole P.
van Lindert, Anne S. R.
Cillessen, Saskia A. G. M.
van den Broek, Daan
van den Heuvel, Michel M.
Monkhorst, Kim
author_facet Schouten, Robert D.
Vessies, Daan C. L.
Bosch, Linda J. W.
Barlo, Nicole P.
van Lindert, Anne S. R.
Cillessen, Saskia A. G. M.
van den Broek, Daan
van den Heuvel, Michel M.
Monkhorst, Kim
author_sort Schouten, Robert D.
collection PubMed
description Comprehensive molecular profiling (CMP) plays an essential role in clinical decision making in metastatic non–small-cell lung cancer (mNSCLC). Circulating tumor DNA (ctDNA) analysis provides possibilities for molecular tumor profiling. In this study, we aim to explore the additional value of centralized ctDNA profiling next to current standard-of-care protocolled tissue-based molecular profiling (SoC-TMP) in the primary diagnostic setting of mNSCLC in the Netherlands. METHODS: Pretreatment plasma samples from 209 patients with confirmed mNSCLC were analyzed retrospectively using the NGS AVENIO ctDNA Targeted Kit (Roche Diagnostics, Basel, Switzerland) and compared with paired prospective pretreatment tissue-based molecular profiling from patient records. The AVENIO panel is designed to detect single-nucleotide variants, copy-number variations, insertions or deletions, and tyrosine kinase fusion in 17 genes. RESULTS: Potentially targetable drivers were detected with SoC-TMP alone in 34.4% of patients. Addition of clonal hematopoiesis of indeterminate potential–corrected, plasma-based CMP increased this to 39.7% (P < .001). Concordance between SoC-TMP and plasma-CMP was 86.6% for potentially targetable drivers. Clinical sensitivity of plasma-CMP was 75.2% for any oncogenic driver. Specificity and positive predictive value were more than 90% for all oncogenic drivers. CONCLUSION: Plasma-CMP is a reliable tool in the primary diagnostic setting, although it cannot fully replace SoC-TMP. Complementary profiling by combined SoC-TMP and plasma-CMP increased the proportion of patients who are eligible for targeted treatment.
format Online
Article
Text
id pubmed-8277301
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Wolters Kluwer Health
record_format MEDLINE/PubMed
spelling pubmed-82773012021-10-08 Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer Schouten, Robert D. Vessies, Daan C. L. Bosch, Linda J. W. Barlo, Nicole P. van Lindert, Anne S. R. Cillessen, Saskia A. G. M. van den Broek, Daan van den Heuvel, Michel M. Monkhorst, Kim JCO Precis Oncol Original Reports Comprehensive molecular profiling (CMP) plays an essential role in clinical decision making in metastatic non–small-cell lung cancer (mNSCLC). Circulating tumor DNA (ctDNA) analysis provides possibilities for molecular tumor profiling. In this study, we aim to explore the additional value of centralized ctDNA profiling next to current standard-of-care protocolled tissue-based molecular profiling (SoC-TMP) in the primary diagnostic setting of mNSCLC in the Netherlands. METHODS: Pretreatment plasma samples from 209 patients with confirmed mNSCLC were analyzed retrospectively using the NGS AVENIO ctDNA Targeted Kit (Roche Diagnostics, Basel, Switzerland) and compared with paired prospective pretreatment tissue-based molecular profiling from patient records. The AVENIO panel is designed to detect single-nucleotide variants, copy-number variations, insertions or deletions, and tyrosine kinase fusion in 17 genes. RESULTS: Potentially targetable drivers were detected with SoC-TMP alone in 34.4% of patients. Addition of clonal hematopoiesis of indeterminate potential–corrected, plasma-based CMP increased this to 39.7% (P < .001). Concordance between SoC-TMP and plasma-CMP was 86.6% for potentially targetable drivers. Clinical sensitivity of plasma-CMP was 75.2% for any oncogenic driver. Specificity and positive predictive value were more than 90% for all oncogenic drivers. CONCLUSION: Plasma-CMP is a reliable tool in the primary diagnostic setting, although it cannot fully replace SoC-TMP. Complementary profiling by combined SoC-TMP and plasma-CMP increased the proportion of patients who are eligible for targeted treatment. Wolters Kluwer Health 2021-07-09 /pmc/articles/PMC8277301/ /pubmed/34632253 http://dx.doi.org/10.1200/PO.20.00450 Text en © 2021 by American Society of Clinical Oncology https://creativecommons.org/licenses/by-nc-nd/4.0/Creative Commons Attribution Non-Commercial No Derivatives 4.0 License: http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/)
spellingShingle Original Reports
Schouten, Robert D.
Vessies, Daan C. L.
Bosch, Linda J. W.
Barlo, Nicole P.
van Lindert, Anne S. R.
Cillessen, Saskia A. G. M.
van den Broek, Daan
van den Heuvel, Michel M.
Monkhorst, Kim
Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer
title Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer
title_full Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer
title_fullStr Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer
title_full_unstemmed Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer
title_short Clinical Utility of Plasma-Based Comprehensive Molecular Profiling in Advanced Non–Small-Cell Lung Cancer
title_sort clinical utility of plasma-based comprehensive molecular profiling in advanced non–small-cell lung cancer
topic Original Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8277301/
https://www.ncbi.nlm.nih.gov/pubmed/34632253
http://dx.doi.org/10.1200/PO.20.00450
work_keys_str_mv AT schoutenrobertd clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT vessiesdaancl clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT boschlindajw clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT barlonicolep clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT vanlindertannesr clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT cillessensaskiaagm clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT vandenbroekdaan clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT vandenheuvelmichelm clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer
AT monkhorstkim clinicalutilityofplasmabasedcomprehensivemolecularprofilinginadvancednonsmallcelllungcancer