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Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action

An effective monotherapy to target the complex and multifactorial pathology of SARS-CoV-2 infection poses a challenge to drug repositioning, which can be improved by combination therapy. We developed an online network pharmacology-based drug repositioning platform, COVID-CDR (http://vafaeelab.com/CO...

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Detalles Bibliográficos
Autores principales: Azad, A.K.M., Fatima, Shadma, Capraro, Alexander, Waters, Shafagh A., Vafaee, Fatemeh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8277549/
https://www.ncbi.nlm.nih.gov/pubmed/34278363
http://dx.doi.org/10.1016/j.patter.2021.100325
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author Azad, A.K.M.
Fatima, Shadma
Capraro, Alexander
Waters, Shafagh A.
Vafaee, Fatemeh
author_facet Azad, A.K.M.
Fatima, Shadma
Capraro, Alexander
Waters, Shafagh A.
Vafaee, Fatemeh
author_sort Azad, A.K.M.
collection PubMed
description An effective monotherapy to target the complex and multifactorial pathology of SARS-CoV-2 infection poses a challenge to drug repositioning, which can be improved by combination therapy. We developed an online network pharmacology-based drug repositioning platform, COVID-CDR (http://vafaeelab.com/COVID19repositioning.html), that enables a visual and quantitative investigation of the interplay between the primary drug targets and the SARS-CoV-2-host interactome in the human protein-protein interaction network. COVID-CDR prioritizes drug combinations with potential to act synergistically through different, yet potentially complementary, pathways. It provides the options for understanding multi-evidence drug-pair similarity scores along with several other relevant information on individual drugs or drug pairs. Overall, COVID-CDR is a first-of-its-kind online platform that provides a systematic approach for pre-clinical in silico investigation of combination therapies for treating COVID-19 at the fingertips of the clinicians and researchers.
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spelling pubmed-82775492021-07-14 Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action Azad, A.K.M. Fatima, Shadma Capraro, Alexander Waters, Shafagh A. Vafaee, Fatemeh Patterns (N Y) Descriptor An effective monotherapy to target the complex and multifactorial pathology of SARS-CoV-2 infection poses a challenge to drug repositioning, which can be improved by combination therapy. We developed an online network pharmacology-based drug repositioning platform, COVID-CDR (http://vafaeelab.com/COVID19repositioning.html), that enables a visual and quantitative investigation of the interplay between the primary drug targets and the SARS-CoV-2-host interactome in the human protein-protein interaction network. COVID-CDR prioritizes drug combinations with potential to act synergistically through different, yet potentially complementary, pathways. It provides the options for understanding multi-evidence drug-pair similarity scores along with several other relevant information on individual drugs or drug pairs. Overall, COVID-CDR is a first-of-its-kind online platform that provides a systematic approach for pre-clinical in silico investigation of combination therapies for treating COVID-19 at the fingertips of the clinicians and researchers. Elsevier 2021-07-14 /pmc/articles/PMC8277549/ /pubmed/34278363 http://dx.doi.org/10.1016/j.patter.2021.100325 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Descriptor
Azad, A.K.M.
Fatima, Shadma
Capraro, Alexander
Waters, Shafagh A.
Vafaee, Fatemeh
Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action
title Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action
title_full Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action
title_fullStr Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action
title_full_unstemmed Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action
title_short Integrative resource for network-based investigation of COVID-19 combinatorial drug repositioning and mechanism of action
title_sort integrative resource for network-based investigation of covid-19 combinatorial drug repositioning and mechanism of action
topic Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8277549/
https://www.ncbi.nlm.nih.gov/pubmed/34278363
http://dx.doi.org/10.1016/j.patter.2021.100325
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