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Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search
We searched the lowest-energy structures of hydrated calcium ion clusters Ca(2+)(H(2)O)(n) (n = 10–18) in the whole potential energy surface by the comprehensive genetic algorithm (CGA). The lowest-energy structures of Ca(2+)(H(2)O)(10–12) clusters show that Ca(2+) is always surrounded by six H(2)O...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8277924/ https://www.ncbi.nlm.nih.gov/pubmed/34277560 http://dx.doi.org/10.3389/fchem.2021.637750 |
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author | Shi, Ruili Zhao, Zhi Huang, Xiaoming Wang, Pengju Su, Yan Sai, Linwei Liang, Xiaoqing Han, Haiyan Zhao, Jijun |
author_facet | Shi, Ruili Zhao, Zhi Huang, Xiaoming Wang, Pengju Su, Yan Sai, Linwei Liang, Xiaoqing Han, Haiyan Zhao, Jijun |
author_sort | Shi, Ruili |
collection | PubMed |
description | We searched the lowest-energy structures of hydrated calcium ion clusters Ca(2+)(H(2)O)(n) (n = 10–18) in the whole potential energy surface by the comprehensive genetic algorithm (CGA). The lowest-energy structures of Ca(2+)(H(2)O)(10–12) clusters show that Ca(2+) is always surrounded by six H(2)O molecules in the first shell. The number of first-shell water molecules changes from six to eight at n = 12. In the range of n = 12–18, the number of first-shell water molecules fluctuates between seven and eight, meaning that the cluster could pack the water molecules in the outer shell even though the inner shell is not full. Meanwhile, the number of water molecules in the second shell and the total hydrogen bonds increase with an increase in the cluster size. The distance between Ca(2+) and the adjacent water molecules increases, while the average adjacent O-O distance decreases as the cluster size increases, indicating that the interaction between Ca(2+) and the adjacent water molecules becomes weaker and the interaction between water molecules becomes stronger. The interaction energy and natural bond orbital results show that the interaction between Ca(2+) and the water molecules is mainly derived from the interaction between Ca(2+) and the adjacent water molecules. The charge transfer from the lone pair electron orbital of adjacent oxygen atoms to the empty orbital of Ca(2+) plays a leading role in the interaction between Ca(2+) and water molecules. |
format | Online Article Text |
id | pubmed-8277924 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82779242021-07-15 Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search Shi, Ruili Zhao, Zhi Huang, Xiaoming Wang, Pengju Su, Yan Sai, Linwei Liang, Xiaoqing Han, Haiyan Zhao, Jijun Front Chem Chemistry We searched the lowest-energy structures of hydrated calcium ion clusters Ca(2+)(H(2)O)(n) (n = 10–18) in the whole potential energy surface by the comprehensive genetic algorithm (CGA). The lowest-energy structures of Ca(2+)(H(2)O)(10–12) clusters show that Ca(2+) is always surrounded by six H(2)O molecules in the first shell. The number of first-shell water molecules changes from six to eight at n = 12. In the range of n = 12–18, the number of first-shell water molecules fluctuates between seven and eight, meaning that the cluster could pack the water molecules in the outer shell even though the inner shell is not full. Meanwhile, the number of water molecules in the second shell and the total hydrogen bonds increase with an increase in the cluster size. The distance between Ca(2+) and the adjacent water molecules increases, while the average adjacent O-O distance decreases as the cluster size increases, indicating that the interaction between Ca(2+) and the adjacent water molecules becomes weaker and the interaction between water molecules becomes stronger. The interaction energy and natural bond orbital results show that the interaction between Ca(2+) and the water molecules is mainly derived from the interaction between Ca(2+) and the adjacent water molecules. The charge transfer from the lone pair electron orbital of adjacent oxygen atoms to the empty orbital of Ca(2+) plays a leading role in the interaction between Ca(2+) and water molecules. Frontiers Media S.A. 2021-06-30 /pmc/articles/PMC8277924/ /pubmed/34277560 http://dx.doi.org/10.3389/fchem.2021.637750 Text en Copyright © 2021 Shi, Zhao, Huang, Wang, Su, Sai, Liang, Han and Zhao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Chemistry Shi, Ruili Zhao, Zhi Huang, Xiaoming Wang, Pengju Su, Yan Sai, Linwei Liang, Xiaoqing Han, Haiyan Zhao, Jijun Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search |
title | Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search |
title_full | Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search |
title_fullStr | Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search |
title_full_unstemmed | Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search |
title_short | Ground-State Structures of Hydrated Calcium Ion Clusters From Comprehensive Genetic Algorithm Search |
title_sort | ground-state structures of hydrated calcium ion clusters from comprehensive genetic algorithm search |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8277924/ https://www.ncbi.nlm.nih.gov/pubmed/34277560 http://dx.doi.org/10.3389/fchem.2021.637750 |
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