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Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization

BACKGROUND: The knowledge of cancer burden in the population, its time trends, and the possibility of international comparison is an important starting point for cancer programs. A reliable interactive tool describing cancer epidemiology in children and adolescents has been nonexistent in the Czech...

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Autores principales: Krejčí, Denisa, Karolyi, Matěj, Pehalová, Lucie, Ščavnický, Jakub, Zapletalová, Michaela, Katinová, Ivana, Štěrba, Jaroslav, Starý, Jan, Šnajdrová, Lenka, Komenda, Martin, Dušek, Ladislav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8278294/
https://www.ncbi.nlm.nih.gov/pubmed/34185010
http://dx.doi.org/10.2196/23990
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author Krejčí, Denisa
Karolyi, Matěj
Pehalová, Lucie
Ščavnický, Jakub
Zapletalová, Michaela
Katinová, Ivana
Štěrba, Jaroslav
Starý, Jan
Šnajdrová, Lenka
Komenda, Martin
Dušek, Ladislav
author_facet Krejčí, Denisa
Karolyi, Matěj
Pehalová, Lucie
Ščavnický, Jakub
Zapletalová, Michaela
Katinová, Ivana
Štěrba, Jaroslav
Starý, Jan
Šnajdrová, Lenka
Komenda, Martin
Dušek, Ladislav
author_sort Krejčí, Denisa
collection PubMed
description BACKGROUND: The knowledge of cancer burden in the population, its time trends, and the possibility of international comparison is an important starting point for cancer programs. A reliable interactive tool describing cancer epidemiology in children and adolescents has been nonexistent in the Czech Republic until recently. OBJECTIVE: The goal of this study is to develop a new web portal entitled the Czech Childhood Cancer Information System (CCCIS), which would provide information on childhood cancer epidemiology in the Czech Republic. METHODS: Data on childhood cancers have been obtained from the Czech National Cancer Registry. These data were validated using the clinical database of childhood cancer patients and subsequently combined with data from the National Register of Hospitalised Patients and with data from death certificates. These validated data were then used to determine the incidence and survival rates of childhood cancer patients aged 0 to 19 years who were diagnosed in the period 1994 to 2016 (N=9435). Data from death certificates were used to monitor long-term mortality trends. The technical solution is based on the robust PHP development Symfony framework, with the PostgreSQL system used to accommodate the data basis. RESULTS: The web portal has been available for anyone since November 2019, providing basic information for experts (ie, analyses and publications) on individual diagnostic groups of childhood cancers. It involves an interactive tool for analytical reporting, which provides information on the following basic topics in the form of graphs or tables: incidence, mortality, and overall survival. Feedback was obtained and the accuracy of outputs published on the CCCIS portal was verified using the following methods: the validation of the theoretical background and the user testing. CONCLUSIONS: We developed software capable of processing data from multiple sources, which is freely available to all users and makes it possible to carry out automated analyses even for users without mathematical background; a simple selection of a topic to be analyzed is required from the user.
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spelling pubmed-82782942021-07-26 Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization Krejčí, Denisa Karolyi, Matěj Pehalová, Lucie Ščavnický, Jakub Zapletalová, Michaela Katinová, Ivana Štěrba, Jaroslav Starý, Jan Šnajdrová, Lenka Komenda, Martin Dušek, Ladislav JMIR Public Health Surveill Original Paper BACKGROUND: The knowledge of cancer burden in the population, its time trends, and the possibility of international comparison is an important starting point for cancer programs. A reliable interactive tool describing cancer epidemiology in children and adolescents has been nonexistent in the Czech Republic until recently. OBJECTIVE: The goal of this study is to develop a new web portal entitled the Czech Childhood Cancer Information System (CCCIS), which would provide information on childhood cancer epidemiology in the Czech Republic. METHODS: Data on childhood cancers have been obtained from the Czech National Cancer Registry. These data were validated using the clinical database of childhood cancer patients and subsequently combined with data from the National Register of Hospitalised Patients and with data from death certificates. These validated data were then used to determine the incidence and survival rates of childhood cancer patients aged 0 to 19 years who were diagnosed in the period 1994 to 2016 (N=9435). Data from death certificates were used to monitor long-term mortality trends. The technical solution is based on the robust PHP development Symfony framework, with the PostgreSQL system used to accommodate the data basis. RESULTS: The web portal has been available for anyone since November 2019, providing basic information for experts (ie, analyses and publications) on individual diagnostic groups of childhood cancers. It involves an interactive tool for analytical reporting, which provides information on the following basic topics in the form of graphs or tables: incidence, mortality, and overall survival. Feedback was obtained and the accuracy of outputs published on the CCCIS portal was verified using the following methods: the validation of the theoretical background and the user testing. CONCLUSIONS: We developed software capable of processing data from multiple sources, which is freely available to all users and makes it possible to carry out automated analyses even for users without mathematical background; a simple selection of a topic to be analyzed is required from the user. JMIR Publications 2021-06-29 /pmc/articles/PMC8278294/ /pubmed/34185010 http://dx.doi.org/10.2196/23990 Text en ©Denisa Krejčí, Matěj Karolyi, Lucie Pehalová, Jakub Ščavnický, Michaela Zapletalová, Ivana Katinová, Jaroslav Štěrba, Jan Starý, Lenka Šnajdrová, Martin Komenda, Ladislav Dušek. Originally published in JMIR Public Health and Surveillance (https://publichealth.jmir.org), 29.06.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Public Health and Surveillance, is properly cited. The complete bibliographic information, a link to the original publication on https://publichealth.jmir.org, as well as this copyright and license information must be included.
spellingShingle Original Paper
Krejčí, Denisa
Karolyi, Matěj
Pehalová, Lucie
Ščavnický, Jakub
Zapletalová, Michaela
Katinová, Ivana
Štěrba, Jaroslav
Starý, Jan
Šnajdrová, Lenka
Komenda, Martin
Dušek, Ladislav
Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization
title Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization
title_full Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization
title_fullStr Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization
title_full_unstemmed Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization
title_short Development of the Czech Childhood Cancer Information System: Data Analysis and Interactive Visualization
title_sort development of the czech childhood cancer information system: data analysis and interactive visualization
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8278294/
https://www.ncbi.nlm.nih.gov/pubmed/34185010
http://dx.doi.org/10.2196/23990
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