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Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS)
Inadequate myelination in the central nervous system is associated with neurodevelopmental complications. Thus, quantitative, high spatial resolution measurements of myelin levels are highly desirable. We used spatial light interference microcopy (SLIM), a highly sensitive quantitative phase imaging...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AIP Publishing LLC
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8278825/ https://www.ncbi.nlm.nih.gov/pubmed/34291159 http://dx.doi.org/10.1063/5.0050889 |
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author | Fanous, Michael Shi, Chuqiao Caputo, Megan P. Rund, Laurie A. Johnson, Rodney W. Das, Tapas Kuchan, Matthew J. Sobh, Nahil Popescu, Gabriel |
author_facet | Fanous, Michael Shi, Chuqiao Caputo, Megan P. Rund, Laurie A. Johnson, Rodney W. Das, Tapas Kuchan, Matthew J. Sobh, Nahil Popescu, Gabriel |
author_sort | Fanous, Michael |
collection | PubMed |
description | Inadequate myelination in the central nervous system is associated with neurodevelopmental complications. Thus, quantitative, high spatial resolution measurements of myelin levels are highly desirable. We used spatial light interference microcopy (SLIM), a highly sensitive quantitative phase imaging (QPI) technique, to correlate the dry mass content of myelin in piglet brain tissue with dietary changes and gestational size. We combined SLIM micrographs with an artificial intelligence (AI) classifying model that allows us to discern subtle disparities in myelin distributions with high accuracy. This concept of combining QPI label-free data with AI for the purpose of extracting molecular specificity has recently been introduced by our laboratory as phase imaging with computational specificity. Training on 8000 SLIM images of piglet brain tissue with the 71-layer transfer learning model Xception, we created a two-parameter classification to differentiate gestational size and diet type with an accuracy of 82% and 80%, respectively. To our knowledge, this type of evaluation is impossible to perform by an expert pathologist or other techniques. |
format | Online Article Text |
id | pubmed-8278825 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AIP Publishing LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-82788252021-07-19 Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS) Fanous, Michael Shi, Chuqiao Caputo, Megan P. Rund, Laurie A. Johnson, Rodney W. Das, Tapas Kuchan, Matthew J. Sobh, Nahil Popescu, Gabriel APL Photonics Articles Inadequate myelination in the central nervous system is associated with neurodevelopmental complications. Thus, quantitative, high spatial resolution measurements of myelin levels are highly desirable. We used spatial light interference microcopy (SLIM), a highly sensitive quantitative phase imaging (QPI) technique, to correlate the dry mass content of myelin in piglet brain tissue with dietary changes and gestational size. We combined SLIM micrographs with an artificial intelligence (AI) classifying model that allows us to discern subtle disparities in myelin distributions with high accuracy. This concept of combining QPI label-free data with AI for the purpose of extracting molecular specificity has recently been introduced by our laboratory as phase imaging with computational specificity. Training on 8000 SLIM images of piglet brain tissue with the 71-layer transfer learning model Xception, we created a two-parameter classification to differentiate gestational size and diet type with an accuracy of 82% and 80%, respectively. To our knowledge, this type of evaluation is impossible to perform by an expert pathologist or other techniques. AIP Publishing LLC 2021-07-01 2021-07-12 /pmc/articles/PMC8278825/ /pubmed/34291159 http://dx.doi.org/10.1063/5.0050889 Text en © 2021 Author(s). https://creativecommons.org/licenses/by/4.0/All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Articles Fanous, Michael Shi, Chuqiao Caputo, Megan P. Rund, Laurie A. Johnson, Rodney W. Das, Tapas Kuchan, Matthew J. Sobh, Nahil Popescu, Gabriel Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS) |
title | Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS) |
title_full | Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS) |
title_fullStr | Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS) |
title_full_unstemmed | Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS) |
title_short | Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS) |
title_sort | label-free screening of brain tissue myelin content using phase imaging with computational specificity (pics) |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8278825/ https://www.ncbi.nlm.nih.gov/pubmed/34291159 http://dx.doi.org/10.1063/5.0050889 |
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