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Does Electric Friction Matter in Living Cells?
[Image: see text] The thermal motion of charged proteins causes randomly fluctuating electric fields inside cells. According to the fluctuation–dissipation theorem, there is an additional friction force associated with such fluctuations. However, the impact of these fluctuations on the diffusion and...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8279543/ https://www.ncbi.nlm.nih.gov/pubmed/34081479 http://dx.doi.org/10.1021/acs.jpcb.1c02783 |
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author | Makarov, Dmitrii E. Hofmann, Hagen |
author_facet | Makarov, Dmitrii E. Hofmann, Hagen |
author_sort | Makarov, Dmitrii E. |
collection | PubMed |
description | [Image: see text] The thermal motion of charged proteins causes randomly fluctuating electric fields inside cells. According to the fluctuation–dissipation theorem, there is an additional friction force associated with such fluctuations. However, the impact of these fluctuations on the diffusion and dynamics of proteins in the cytoplasm is unclear. Here, we provide an order-of-magnitude estimate of this effect by treating electric field fluctuations within a generalized Langevin equation model with a time-dependent friction memory kernel. We find that electric friction is generally negligible compared to solvent friction. However, a significant slowdown of protein diffusion and dynamics is expected for biomolecules with high net charges such as intrinsically disordered proteins and RNA. The results show that direct contacts between biomolecules in a cell are not necessarily required to alter their dynamics. |
format | Online Article Text |
id | pubmed-8279543 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-82795432021-07-15 Does Electric Friction Matter in Living Cells? Makarov, Dmitrii E. Hofmann, Hagen J Phys Chem B [Image: see text] The thermal motion of charged proteins causes randomly fluctuating electric fields inside cells. According to the fluctuation–dissipation theorem, there is an additional friction force associated with such fluctuations. However, the impact of these fluctuations on the diffusion and dynamics of proteins in the cytoplasm is unclear. Here, we provide an order-of-magnitude estimate of this effect by treating electric field fluctuations within a generalized Langevin equation model with a time-dependent friction memory kernel. We find that electric friction is generally negligible compared to solvent friction. However, a significant slowdown of protein diffusion and dynamics is expected for biomolecules with high net charges such as intrinsically disordered proteins and RNA. The results show that direct contacts between biomolecules in a cell are not necessarily required to alter their dynamics. American Chemical Society 2021-06-03 2021-06-17 /pmc/articles/PMC8279543/ /pubmed/34081479 http://dx.doi.org/10.1021/acs.jpcb.1c02783 Text en © 2021 The Authors. Published by American Chemical Society Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Makarov, Dmitrii E. Hofmann, Hagen Does Electric Friction Matter in Living Cells? |
title | Does Electric Friction Matter in Living Cells? |
title_full | Does Electric Friction Matter in Living Cells? |
title_fullStr | Does Electric Friction Matter in Living Cells? |
title_full_unstemmed | Does Electric Friction Matter in Living Cells? |
title_short | Does Electric Friction Matter in Living Cells? |
title_sort | does electric friction matter in living cells? |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8279543/ https://www.ncbi.nlm.nih.gov/pubmed/34081479 http://dx.doi.org/10.1021/acs.jpcb.1c02783 |
work_keys_str_mv | AT makarovdmitriie doeselectricfrictionmatterinlivingcells AT hofmannhagen doeselectricfrictionmatterinlivingcells |