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Does Electric Friction Matter in Living Cells?

[Image: see text] The thermal motion of charged proteins causes randomly fluctuating electric fields inside cells. According to the fluctuation–dissipation theorem, there is an additional friction force associated with such fluctuations. However, the impact of these fluctuations on the diffusion and...

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Autores principales: Makarov, Dmitrii E., Hofmann, Hagen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8279543/
https://www.ncbi.nlm.nih.gov/pubmed/34081479
http://dx.doi.org/10.1021/acs.jpcb.1c02783
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author Makarov, Dmitrii E.
Hofmann, Hagen
author_facet Makarov, Dmitrii E.
Hofmann, Hagen
author_sort Makarov, Dmitrii E.
collection PubMed
description [Image: see text] The thermal motion of charged proteins causes randomly fluctuating electric fields inside cells. According to the fluctuation–dissipation theorem, there is an additional friction force associated with such fluctuations. However, the impact of these fluctuations on the diffusion and dynamics of proteins in the cytoplasm is unclear. Here, we provide an order-of-magnitude estimate of this effect by treating electric field fluctuations within a generalized Langevin equation model with a time-dependent friction memory kernel. We find that electric friction is generally negligible compared to solvent friction. However, a significant slowdown of protein diffusion and dynamics is expected for biomolecules with high net charges such as intrinsically disordered proteins and RNA. The results show that direct contacts between biomolecules in a cell are not necessarily required to alter their dynamics.
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spelling pubmed-82795432021-07-15 Does Electric Friction Matter in Living Cells? Makarov, Dmitrii E. Hofmann, Hagen J Phys Chem B [Image: see text] The thermal motion of charged proteins causes randomly fluctuating electric fields inside cells. According to the fluctuation–dissipation theorem, there is an additional friction force associated with such fluctuations. However, the impact of these fluctuations on the diffusion and dynamics of proteins in the cytoplasm is unclear. Here, we provide an order-of-magnitude estimate of this effect by treating electric field fluctuations within a generalized Langevin equation model with a time-dependent friction memory kernel. We find that electric friction is generally negligible compared to solvent friction. However, a significant slowdown of protein diffusion and dynamics is expected for biomolecules with high net charges such as intrinsically disordered proteins and RNA. The results show that direct contacts between biomolecules in a cell are not necessarily required to alter their dynamics. American Chemical Society 2021-06-03 2021-06-17 /pmc/articles/PMC8279543/ /pubmed/34081479 http://dx.doi.org/10.1021/acs.jpcb.1c02783 Text en © 2021 The Authors. Published by American Chemical Society Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Makarov, Dmitrii E.
Hofmann, Hagen
Does Electric Friction Matter in Living Cells?
title Does Electric Friction Matter in Living Cells?
title_full Does Electric Friction Matter in Living Cells?
title_fullStr Does Electric Friction Matter in Living Cells?
title_full_unstemmed Does Electric Friction Matter in Living Cells?
title_short Does Electric Friction Matter in Living Cells?
title_sort does electric friction matter in living cells?
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8279543/
https://www.ncbi.nlm.nih.gov/pubmed/34081479
http://dx.doi.org/10.1021/acs.jpcb.1c02783
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