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Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma
Autophagy has an important role in regulating tumor cell survival. However, the roles of autophagy-related genes (ARGs) during colon adenocarcinoma (COAD) progression and their prognostic value have remained elusive. The present study aimed to identify the correlation between ARGs and the progressio...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8281215/ https://www.ncbi.nlm.nih.gov/pubmed/34306201 http://dx.doi.org/10.3892/etm.2021.10364 |
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author | Zhang, Xianyi Xu, Runtao Feng, Wenjing Xu, Jiapeng Liang, Yulong Mu, Jinghui |
author_facet | Zhang, Xianyi Xu, Runtao Feng, Wenjing Xu, Jiapeng Liang, Yulong Mu, Jinghui |
author_sort | Zhang, Xianyi |
collection | PubMed |
description | Autophagy has an important role in regulating tumor cell survival. However, the roles of autophagy-related genes (ARGs) during colon adenocarcinoma (COAD) progression and their prognostic value have remained elusive. The present study aimed to identify the correlation between ARGs and the progression of COAD, as well as the prognostic significance of ARGs. The transcriptome profiles and the corresponding clinicopathological information of patients with COAD were downloaded from The Cancer Genome Atlas and Genotype-Tissue Expression databases. A list of ARGs was obtained from the Human Autophagy Database and bioinformatics analysis was performed to investigate the functions of these ARGs. Statistical analyses of these genes were performed to identify independent prognostic markers. The selected prognostic markers were then validated in 15 patients with COAD via immunohistochemistry. Differentially expressed ARGs between normal and tumor tissues were identified. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses revealed that the differentially expressed ARGs were mainly enriched in toxoplasmosis and pathways in cancer. The ATG4B, DAPK1 and SERPINA1 genes were determined to be associated with COAD progression. In addition, a risk signature was proposed that may serve as an independent prognostic marker. In conclusion, ATG4B, DAPK1 and SERPINA1 are crucial participants in tumorigenesis of COAD. The present study may promote the development of novel treatment strategies for COAD. |
format | Online Article Text |
id | pubmed-8281215 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-82812152021-07-22 Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma Zhang, Xianyi Xu, Runtao Feng, Wenjing Xu, Jiapeng Liang, Yulong Mu, Jinghui Exp Ther Med Articles Autophagy has an important role in regulating tumor cell survival. However, the roles of autophagy-related genes (ARGs) during colon adenocarcinoma (COAD) progression and their prognostic value have remained elusive. The present study aimed to identify the correlation between ARGs and the progression of COAD, as well as the prognostic significance of ARGs. The transcriptome profiles and the corresponding clinicopathological information of patients with COAD were downloaded from The Cancer Genome Atlas and Genotype-Tissue Expression databases. A list of ARGs was obtained from the Human Autophagy Database and bioinformatics analysis was performed to investigate the functions of these ARGs. Statistical analyses of these genes were performed to identify independent prognostic markers. The selected prognostic markers were then validated in 15 patients with COAD via immunohistochemistry. Differentially expressed ARGs between normal and tumor tissues were identified. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses revealed that the differentially expressed ARGs were mainly enriched in toxoplasmosis and pathways in cancer. The ATG4B, DAPK1 and SERPINA1 genes were determined to be associated with COAD progression. In addition, a risk signature was proposed that may serve as an independent prognostic marker. In conclusion, ATG4B, DAPK1 and SERPINA1 are crucial participants in tumorigenesis of COAD. The present study may promote the development of novel treatment strategies for COAD. D.A. Spandidos 2021-09 2021-07-01 /pmc/articles/PMC8281215/ /pubmed/34306201 http://dx.doi.org/10.3892/etm.2021.10364 Text en Copyright: © Zhang et al. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Zhang, Xianyi Xu, Runtao Feng, Wenjing Xu, Jiapeng Liang, Yulong Mu, Jinghui Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma |
title | Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma |
title_full | Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma |
title_fullStr | Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma |
title_full_unstemmed | Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma |
title_short | Autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma |
title_sort | autophagy-related genes contribute to malignant progression and have a clinical prognostic impact in colon adenocarcinoma |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8281215/ https://www.ncbi.nlm.nih.gov/pubmed/34306201 http://dx.doi.org/10.3892/etm.2021.10364 |
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