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Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma

Due to the rarity and heterogeneity, it is challenging to explore and develop new therapeutic targets for patients with sarcoma. Recently, immune cell infiltration in the tumor microenvironment (TME) was widely studied, which provided a novel potential approach for cancer treatment. The competing en...

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Autores principales: Shi, Deyao, Mu, Shidai, Pu, Feifei, Zhong, Binlong, Hu, Binwu, Liu, Jianxiang, He, Tongchuan, Zhang, Zhicai, Shao, Zengwu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8281254/
https://www.ncbi.nlm.nih.gov/pubmed/34277600
http://dx.doi.org/10.3389/fcell.2021.652300
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author Shi, Deyao
Mu, Shidai
Pu, Feifei
Zhong, Binlong
Hu, Binwu
Liu, Jianxiang
He, Tongchuan
Zhang, Zhicai
Shao, Zengwu
author_facet Shi, Deyao
Mu, Shidai
Pu, Feifei
Zhong, Binlong
Hu, Binwu
Liu, Jianxiang
He, Tongchuan
Zhang, Zhicai
Shao, Zengwu
author_sort Shi, Deyao
collection PubMed
description Due to the rarity and heterogeneity, it is challenging to explore and develop new therapeutic targets for patients with sarcoma. Recently, immune cell infiltration in the tumor microenvironment (TME) was widely studied, which provided a novel potential approach for cancer treatment. The competing endogenous RNA (ceRNA) regulatory network has been reported as a critical molecular mechanism of tumor development. However, the role of the ceRNA regulatory network in the TME of sarcoma remains unclear. In this study, gene expression data and clinical information were obtained from The Cancer Genome Atlas (TCGA) sarcoma datasets, and an immune infiltration-related ceRNA network was constructed, which comprised 14 lncRNAs, 13 miRNAs, and 23 mRNAs. Afterward, we constructed an immune infiltration-related risk score model based on the expression of IRF1, MFNG, hsa-miR-940, and hsa-miR-378a-5p, presenting a promising performance in predicting the prognosis of patients with sarcoma.
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spelling pubmed-82812542021-07-16 Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma Shi, Deyao Mu, Shidai Pu, Feifei Zhong, Binlong Hu, Binwu Liu, Jianxiang He, Tongchuan Zhang, Zhicai Shao, Zengwu Front Cell Dev Biol Cell and Developmental Biology Due to the rarity and heterogeneity, it is challenging to explore and develop new therapeutic targets for patients with sarcoma. Recently, immune cell infiltration in the tumor microenvironment (TME) was widely studied, which provided a novel potential approach for cancer treatment. The competing endogenous RNA (ceRNA) regulatory network has been reported as a critical molecular mechanism of tumor development. However, the role of the ceRNA regulatory network in the TME of sarcoma remains unclear. In this study, gene expression data and clinical information were obtained from The Cancer Genome Atlas (TCGA) sarcoma datasets, and an immune infiltration-related ceRNA network was constructed, which comprised 14 lncRNAs, 13 miRNAs, and 23 mRNAs. Afterward, we constructed an immune infiltration-related risk score model based on the expression of IRF1, MFNG, hsa-miR-940, and hsa-miR-378a-5p, presenting a promising performance in predicting the prognosis of patients with sarcoma. Frontiers Media S.A. 2021-07-01 /pmc/articles/PMC8281254/ /pubmed/34277600 http://dx.doi.org/10.3389/fcell.2021.652300 Text en Copyright © 2021 Shi, Mu, Pu, Zhong, Hu, Liu, He, Zhang and Shao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Shi, Deyao
Mu, Shidai
Pu, Feifei
Zhong, Binlong
Hu, Binwu
Liu, Jianxiang
He, Tongchuan
Zhang, Zhicai
Shao, Zengwu
Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma
title Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma
title_full Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma
title_fullStr Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma
title_full_unstemmed Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma
title_short Development of a Novel Immune Infiltration-Related ceRNA Network and Prognostic Model for Sarcoma
title_sort development of a novel immune infiltration-related cerna network and prognostic model for sarcoma
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8281254/
https://www.ncbi.nlm.nih.gov/pubmed/34277600
http://dx.doi.org/10.3389/fcell.2021.652300
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