Cargando…
A Python Toolbox for Unbiased Statistical Analysis of Fluorescence Intermittency of Multilevel Emitters
[Image: see text] We report on a Python toolbox for unbiased statistical analysis of fluorescence intermittency properties of single emitters. Intermittency, that is, step-wise temporal variations in the instantaneous emission intensity and fluorescence decay rate properties, is common to organic fl...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2021
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8282189/ https://www.ncbi.nlm.nih.gov/pubmed/34276862 http://dx.doi.org/10.1021/acs.jpcc.1c01670 |
_version_ | 1783722966298656768 |
---|---|
author | Palstra, Isabelle M. Koenderink, A. Femius |
author_facet | Palstra, Isabelle M. Koenderink, A. Femius |
author_sort | Palstra, Isabelle M. |
collection | PubMed |
description | [Image: see text] We report on a Python toolbox for unbiased statistical analysis of fluorescence intermittency properties of single emitters. Intermittency, that is, step-wise temporal variations in the instantaneous emission intensity and fluorescence decay rate properties, is common to organic fluorophores, II–VI quantum dots, and perovskite quantum dots alike. Unbiased statistical analysis of intermittency switching time distributions, involved levels, and lifetimes are important to avoid interpretation artifacts. This work provides an implementation of Bayesian changepoint analysis and level clustering applicable to time-tagged single-photon detection data of single emitters that can be applied to real experimental data and as a tool to verify the ramifications of hypothesized mechanistic intermittency models. We provide a detailed Monte Carlo analysis to illustrate these statistics tools and to benchmark the extent to which conclusions can be drawn on the photophysics of highly complex systems, such as perovskite quantum dots that switch between a plethora of states instead of just two. |
format | Online Article Text |
id | pubmed-8282189 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-82821892021-07-16 A Python Toolbox for Unbiased Statistical Analysis of Fluorescence Intermittency of Multilevel Emitters Palstra, Isabelle M. Koenderink, A. Femius J Phys Chem C Nanomater Interfaces [Image: see text] We report on a Python toolbox for unbiased statistical analysis of fluorescence intermittency properties of single emitters. Intermittency, that is, step-wise temporal variations in the instantaneous emission intensity and fluorescence decay rate properties, is common to organic fluorophores, II–VI quantum dots, and perovskite quantum dots alike. Unbiased statistical analysis of intermittency switching time distributions, involved levels, and lifetimes are important to avoid interpretation artifacts. This work provides an implementation of Bayesian changepoint analysis and level clustering applicable to time-tagged single-photon detection data of single emitters that can be applied to real experimental data and as a tool to verify the ramifications of hypothesized mechanistic intermittency models. We provide a detailed Monte Carlo analysis to illustrate these statistics tools and to benchmark the extent to which conclusions can be drawn on the photophysics of highly complex systems, such as perovskite quantum dots that switch between a plethora of states instead of just two. American Chemical Society 2021-05-20 2021-06-10 /pmc/articles/PMC8282189/ /pubmed/34276862 http://dx.doi.org/10.1021/acs.jpcc.1c01670 Text en © 2021 The Authors. Published by American Chemical Society Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Palstra, Isabelle M. Koenderink, A. Femius A Python Toolbox for Unbiased Statistical Analysis of Fluorescence Intermittency of Multilevel Emitters |
title | A Python Toolbox for Unbiased Statistical Analysis
of Fluorescence Intermittency of Multilevel Emitters |
title_full | A Python Toolbox for Unbiased Statistical Analysis
of Fluorescence Intermittency of Multilevel Emitters |
title_fullStr | A Python Toolbox for Unbiased Statistical Analysis
of Fluorescence Intermittency of Multilevel Emitters |
title_full_unstemmed | A Python Toolbox for Unbiased Statistical Analysis
of Fluorescence Intermittency of Multilevel Emitters |
title_short | A Python Toolbox for Unbiased Statistical Analysis
of Fluorescence Intermittency of Multilevel Emitters |
title_sort | python toolbox for unbiased statistical analysis
of fluorescence intermittency of multilevel emitters |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8282189/ https://www.ncbi.nlm.nih.gov/pubmed/34276862 http://dx.doi.org/10.1021/acs.jpcc.1c01670 |
work_keys_str_mv | AT palstraisabellem apythontoolboxforunbiasedstatisticalanalysisoffluorescenceintermittencyofmultilevelemitters AT koenderinkafemius apythontoolboxforunbiasedstatisticalanalysisoffluorescenceintermittencyofmultilevelemitters AT palstraisabellem pythontoolboxforunbiasedstatisticalanalysisoffluorescenceintermittencyofmultilevelemitters AT koenderinkafemius pythontoolboxforunbiasedstatisticalanalysisoffluorescenceintermittencyofmultilevelemitters |