The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae)

Bambusa stenoaurita is an excellent sympodial bamboo species, which is cultivated for its shoots in some parts of China. Here, we sequenced and reported the complete chloroplast genome of B. stenoaurita for the first time. The complete chloroplast genome sequence of B. stenoaurita was generated by d...

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Autores principales: Xia, Haitao, Liu, Xing, Wang, Yueying, Li, Xiaowen, Wang, Jinwang, Jin, Chuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284116/
https://www.ncbi.nlm.nih.gov/pubmed/34345678
http://dx.doi.org/10.1080/23802359.2021.1944373
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author Xia, Haitao
Liu, Xing
Wang, Yueying
Li, Xiaowen
Wang, Jinwang
Jin, Chuan
author_facet Xia, Haitao
Liu, Xing
Wang, Yueying
Li, Xiaowen
Wang, Jinwang
Jin, Chuan
author_sort Xia, Haitao
collection PubMed
description Bambusa stenoaurita is an excellent sympodial bamboo species, which is cultivated for its shoots in some parts of China. Here, we sequenced and reported the complete chloroplast genome of B. stenoaurita for the first time. The complete chloroplast genome sequence of B. stenoaurita was generated by de novo assembly using whole-genome next-generation sequencing. The genome was 139,451 bp in total length, including a large single-copy region of 82,958 bp, a small single-copy region of 12,897 bp, a pair of invert repeats regions of 21,798 bp. The plastid genome contained 134 genes including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 23 chloroplast genomes demonstrates that B. stenoaurita is closely related to B. emeiensis in Bambusoideae.
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spelling pubmed-82841162021-08-02 The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae) Xia, Haitao Liu, Xing Wang, Yueying Li, Xiaowen Wang, Jinwang Jin, Chuan Mitochondrial DNA B Resour Mitogenome Announcement Bambusa stenoaurita is an excellent sympodial bamboo species, which is cultivated for its shoots in some parts of China. Here, we sequenced and reported the complete chloroplast genome of B. stenoaurita for the first time. The complete chloroplast genome sequence of B. stenoaurita was generated by de novo assembly using whole-genome next-generation sequencing. The genome was 139,451 bp in total length, including a large single-copy region of 82,958 bp, a small single-copy region of 12,897 bp, a pair of invert repeats regions of 21,798 bp. The plastid genome contained 134 genes including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 23 chloroplast genomes demonstrates that B. stenoaurita is closely related to B. emeiensis in Bambusoideae. Taylor & Francis 2021-07-14 /pmc/articles/PMC8284116/ /pubmed/34345678 http://dx.doi.org/10.1080/23802359.2021.1944373 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xia, Haitao
Liu, Xing
Wang, Yueying
Li, Xiaowen
Wang, Jinwang
Jin, Chuan
The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae)
title The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae)
title_full The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae)
title_fullStr The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae)
title_full_unstemmed The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae)
title_short The complete chloroplast genome sequence of Bambusa stenoaurita (Bambusoideae)
title_sort complete chloroplast genome sequence of bambusa stenoaurita (bambusoideae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284116/
https://www.ncbi.nlm.nih.gov/pubmed/34345678
http://dx.doi.org/10.1080/23802359.2021.1944373
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