The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’

Camellia japonica ‘Huaheling’ is a rare subtropical Camellia species in China with high ornamental and medicinal value. The complete chloroplast genome of C. japonica ‘Huaheling’ is a 157,001-bp circular DNA molecule containing a large single-copy region (LSC, 86,704 bp), a small single-copy region...

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Autores principales: Yang, Kai, Fan, Menglong, Sun, Yingkun, Liu, Qinghua, Gao, Handong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284130/
https://www.ncbi.nlm.nih.gov/pubmed/34345703
http://dx.doi.org/10.1080/23802359.2021.1948362
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author Yang, Kai
Fan, Menglong
Sun, Yingkun
Liu, Qinghua
Gao, Handong
author_facet Yang, Kai
Fan, Menglong
Sun, Yingkun
Liu, Qinghua
Gao, Handong
author_sort Yang, Kai
collection PubMed
description Camellia japonica ‘Huaheling’ is a rare subtropical Camellia species in China with high ornamental and medicinal value. The complete chloroplast genome of C. japonica ‘Huaheling’ is a 157,001-bp circular DNA molecule containing a large single-copy region (LSC, 86,704 bp), a small single-copy region (SSC, 18,393 bp), and two inverted repeat sequences (IR). Of the 131 genes identified, 86 are protein-coding genes, 8 are rRNA genes, and 37 are tRNA genes. A total of 54 simple sequence repeats (SSRs) were identified in the chloroplast genome. The phylogenetic analysis showed that C. japonica ‘Huaheling’ is clustered with C. japonica. This work provides valuable information for future study of the evolution and genetic diversity of C. japonica ‘Huaheling.’
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spelling pubmed-82841302021-08-02 The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’ Yang, Kai Fan, Menglong Sun, Yingkun Liu, Qinghua Gao, Handong Mitochondrial DNA B Resour Mitogenome Announcement Camellia japonica ‘Huaheling’ is a rare subtropical Camellia species in China with high ornamental and medicinal value. The complete chloroplast genome of C. japonica ‘Huaheling’ is a 157,001-bp circular DNA molecule containing a large single-copy region (LSC, 86,704 bp), a small single-copy region (SSC, 18,393 bp), and two inverted repeat sequences (IR). Of the 131 genes identified, 86 are protein-coding genes, 8 are rRNA genes, and 37 are tRNA genes. A total of 54 simple sequence repeats (SSRs) were identified in the chloroplast genome. The phylogenetic analysis showed that C. japonica ‘Huaheling’ is clustered with C. japonica. This work provides valuable information for future study of the evolution and genetic diversity of C. japonica ‘Huaheling.’ Taylor & Francis 2021-07-14 /pmc/articles/PMC8284130/ /pubmed/34345703 http://dx.doi.org/10.1080/23802359.2021.1948362 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Kai
Fan, Menglong
Sun, Yingkun
Liu, Qinghua
Gao, Handong
The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’
title The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’
title_full The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’
title_fullStr The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’
title_full_unstemmed The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’
title_short The complete chloroplast genome of the subtropical species Camellia japonica ‘Huaheling’
title_sort complete chloroplast genome of the subtropical species camellia japonica ‘huaheling’
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284130/
https://www.ncbi.nlm.nih.gov/pubmed/34345703
http://dx.doi.org/10.1080/23802359.2021.1948362
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