The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum

Talipariti tiliaceum is an evergreen mangrove associate species distributed throughout the world. In this study, the complete chloroplast genome sequence of T. tiliaceum was assembled and characterized using high-throughput sequencing data. The chloroplast genome was found to be 161 766 bp in length...

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Autores principales: Qiu, Zhimin, Zhu, Yunxiao, Du, Zhaokui, Bao, Pingyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284133/
https://www.ncbi.nlm.nih.gov/pubmed/34345700
http://dx.doi.org/10.1080/23802359.2021.1925171
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author Qiu, Zhimin
Zhu, Yunxiao
Du, Zhaokui
Bao, Pingyong
author_facet Qiu, Zhimin
Zhu, Yunxiao
Du, Zhaokui
Bao, Pingyong
author_sort Qiu, Zhimin
collection PubMed
description Talipariti tiliaceum is an evergreen mangrove associate species distributed throughout the world. In this study, the complete chloroplast genome sequence of T. tiliaceum was assembled and characterized using high-throughput sequencing data. The chloroplast genome was found to be 161 766 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 89 273 and 19 551 bp, respectively, which were separated by a pair of 26 471 bp inverted repeat (IR) regions. The genome contained 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. A phylogenetic tree including 66 chloroplast genomes from various species revealed that T. tiliaceum was most related to T. hamabo of the same genus.
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spelling pubmed-82841332021-08-02 The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum Qiu, Zhimin Zhu, Yunxiao Du, Zhaokui Bao, Pingyong Mitochondrial DNA B Resour Mitogenome Announcement Talipariti tiliaceum is an evergreen mangrove associate species distributed throughout the world. In this study, the complete chloroplast genome sequence of T. tiliaceum was assembled and characterized using high-throughput sequencing data. The chloroplast genome was found to be 161 766 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 89 273 and 19 551 bp, respectively, which were separated by a pair of 26 471 bp inverted repeat (IR) regions. The genome contained 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. A phylogenetic tree including 66 chloroplast genomes from various species revealed that T. tiliaceum was most related to T. hamabo of the same genus. Taylor & Francis 2021-07-14 /pmc/articles/PMC8284133/ /pubmed/34345700 http://dx.doi.org/10.1080/23802359.2021.1925171 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Qiu, Zhimin
Zhu, Yunxiao
Du, Zhaokui
Bao, Pingyong
The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum
title The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum
title_full The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum
title_fullStr The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum
title_full_unstemmed The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum
title_short The complete chloroplast genome sequence of the mangrove associate species Talipariti tiliaceum
title_sort complete chloroplast genome sequence of the mangrove associate species talipariti tiliaceum
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284133/
https://www.ncbi.nlm.nih.gov/pubmed/34345700
http://dx.doi.org/10.1080/23802359.2021.1925171
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